Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SspnQ62147 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
SspnQ62147 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SspnQ62147 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
SspnQ62147 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SspnQ62147 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SspnQ62147 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SspnQ62147 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SspnQ62147 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SspnQ62147 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.01□□□□□ -0.81
SspnQ62147 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SspnQ62147 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
SspnQ62147 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SspnQ62147 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
SspnQ62147 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SspnQ62147 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
SspnQ62147 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SspnQ62147 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.01□□□□□ -0.81
SspnQ62147 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
SspnQ62147 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
SspnQ62147 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
SspnQ62147 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
SspnQ62147 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
SspnQ62147 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.01□□□□□ -0.81
SspnQ62147 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SspnQ62147 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
SspnQ62147 Gm23912-201ENSMUST00000104687 87 ntBASIC10.01□□□□□ -0.81
SspnQ62147 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.01□□□□□ -0.81
SspnQ62147 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
SspnQ62147 Gm5187-201ENSMUST00000117317 991 ntBASIC10.01□□□□□ -0.81
SspnQ62147 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.01□□□□□ -0.81
SspnQ62147 Gm25043-201ENSMUST00000158604 212 ntBASIC10.01□□□□□ -0.81
SspnQ62147 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SspnQ62147 Gm27572-201ENSMUST00000183702 255 ntBASIC10.01□□□□□ -0.81
SspnQ62147 Gm28882-201ENSMUST00000185504 314 ntBASIC10.01□□□□□ -0.81
SspnQ62147 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SspnQ62147 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SspnQ62147 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.01□□□□□ -0.81
SspnQ62147 Gm10608-202ENSMUST00000213924 676 ntBASIC10.01□□□□□ -0.81
SspnQ62147 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.01□□□□□ -0.81
SspnQ62147 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SspnQ62147 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SspnQ62147 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SspnQ62147 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
SspnQ62147 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
SspnQ62147 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
SspnQ62147 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
SspnQ62147 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
SspnQ62147 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
SspnQ62147 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SspnQ62147 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.01□□□□□ -0.81
SspnQ62147 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SspnQ62147 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SspnQ62147 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SspnQ62147 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.01□□□□□ -0.81
SspnQ62147 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SspnQ62147 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
SspnQ62147 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SspnQ62147 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SspnQ62147 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
SspnQ62147 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SspnQ62147 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SspnQ62147 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
SspnQ62147 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
SspnQ62147 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SspnQ62147 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SspnQ62147 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10□□□□□ -0.81
SspnQ62147 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10□□□□□ -0.81
SspnQ62147 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
SspnQ62147 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10□□□□□ -0.81
SspnQ62147 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SspnQ62147 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10□□□□□ -0.81
SspnQ62147 Gm19692-201ENSMUST00000203856 2084 ntBASIC10□□□□□ -0.81
SspnQ62147 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
SspnQ62147 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
SspnQ62147 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
SspnQ62147 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
SspnQ62147 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SspnQ62147 AC154352.1-201ENSMUST00000221477 2365 ntBASIC10□□□□□ -0.81
SspnQ62147 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10□□□□□ -0.81
SspnQ62147 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SspnQ62147 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
SspnQ62147 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10□□□□□ -0.81
SspnQ62147 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10□□□□□ -0.81
SspnQ62147 Gm23931-201ENSMUST00000103842 109 ntBASIC10□□□□□ -0.81
SspnQ62147 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10□□□□□ -0.81
SspnQ62147 Gm8062-201ENSMUST00000139696 444 ntBASIC10□□□□□ -0.81
SspnQ62147 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10□□□□□ -0.81
SspnQ62147 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
SspnQ62147 Gm37489-201ENSMUST00000191883 159 ntBASIC10□□□□□ -0.81
SspnQ62147 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10□□□□□ -0.81
SspnQ62147 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10□□□□□ -0.81
SspnQ62147 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10□□□□□ -0.81
SspnQ62147 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SspnQ62147 CU024892.2-201ENSMUST00000224608 832 ntBASIC10□□□□□ -0.81
SspnQ62147 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10□□□□□ -0.81
SspnQ62147 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
SspnQ62147 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
SspnQ62147 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SspnQ62147 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms