Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.84□□□□□ -0.67
VcanQ62059 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
VcanQ62059 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
VcanQ62059 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VcanQ62059 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VcanQ62059 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VcanQ62059 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VcanQ62059 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
VcanQ62059 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
VcanQ62059 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VcanQ62059 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC10.84□□□□□ -0.67
VcanQ62059 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
VcanQ62059 Gm5706-201ENSMUST00000181525 993 ntBASIC10.84□□□□□ -0.67
VcanQ62059 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VcanQ62059 Gm2553-201ENSMUST00000215986 605 ntBASIC10.84□□□□□ -0.67
VcanQ62059 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC10.84□□□□□ -0.67
VcanQ62059 AC102523.1-201ENSMUST00000228706 1144 ntBASIC10.84□□□□□ -0.67
VcanQ62059 Gm4778-201ENSMUST00000098878 1098 ntBASIC10.84□□□□□ -0.67
VcanQ62059 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.84□□□□□ -0.67
VcanQ62059 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.84□□□□□ -0.67
VcanQ62059 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VcanQ62059 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VcanQ62059 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
VcanQ62059 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
VcanQ62059 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VcanQ62059 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
VcanQ62059 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VcanQ62059 Gm10807-201ENSMUST00000177134 795 ntBASIC10.84□□□□□ -0.67
VcanQ62059 AC164556.1-201ENSMUST00000221318 751 ntBASIC10.84□□□□□ -0.67
VcanQ62059 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VcanQ62059 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VcanQ62059 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VcanQ62059 Gm44106-201ENSMUST00000203153 1599 ntBASIC10.84□□□□□ -0.67
VcanQ62059 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VcanQ62059 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VcanQ62059 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
VcanQ62059 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
VcanQ62059 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VcanQ62059 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.84□□□□□ -0.67
VcanQ62059 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VcanQ62059 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC10.83□□□□□ -0.67
VcanQ62059 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
VcanQ62059 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.67
VcanQ62059 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC10.83□□□□□ -0.67
VcanQ62059 Gm5205-201ENSMUST00000182253 1003 ntBASIC10.83□□□□□ -0.67
VcanQ62059 CT010480.2-201ENSMUST00000225424 737 ntBASIC10.83□□□□□ -0.67
VcanQ62059 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
VcanQ62059 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VcanQ62059 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
VcanQ62059 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VcanQ62059 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VcanQ62059 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VcanQ62059 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
VcanQ62059 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VcanQ62059 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC10.83□□□□□ -0.68
VcanQ62059 Gm13422-201ENSMUST00000118834 504 ntBASIC10.83□□□□□ -0.68
VcanQ62059 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.83□□□□□ -0.68
VcanQ62059 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC10.83□□□□□ -0.68
VcanQ62059 Gm44605-201ENSMUST00000206892 949 ntBASIC10.83□□□□□ -0.68
VcanQ62059 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC10.83□□□□□ -0.68
VcanQ62059 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
VcanQ62059 AC137871.1-201ENSMUST00000228278 475 ntBASIC10.83□□□□□ -0.68
VcanQ62059 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
VcanQ62059 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VcanQ62059 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
VcanQ62059 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
VcanQ62059 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
VcanQ62059 Gm23129-201ENSMUST00000104259 132 ntBASIC10.83□□□□□ -0.68
VcanQ62059 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
VcanQ62059 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC10.83□□□□□ -0.68
VcanQ62059 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
VcanQ62059 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC10.83□□□□□ -0.68
VcanQ62059 H2afy3-201ENSMUST00000151919 1112 ntBASIC10.83□□□□□ -0.68
VcanQ62059 Gm23432-201ENSMUST00000157181 131 ntBASIC10.83□□□□□ -0.68
VcanQ62059 Gm27440-201ENSMUST00000184785 107 ntBASIC10.83□□□□□ -0.68
VcanQ62059 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
VcanQ62059 Gm7445-201ENSMUST00000192115 340 ntBASIC10.83□□□□□ -0.68
VcanQ62059 Gm38145-201ENSMUST00000192319 693 ntBASIC10.83□□□□□ -0.68
VcanQ62059 Gm36980-201ENSMUST00000195643 622 ntBASIC10.83□□□□□ -0.68
VcanQ62059 Gm32102-201ENSMUST00000196885 241 ntBASIC10.83□□□□□ -0.68
VcanQ62059 AC129217.1-201ENSMUST00000225181 642 ntBASIC10.83□□□□□ -0.68
VcanQ62059 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VcanQ62059 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VcanQ62059 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.83□□□□□ -0.68
VcanQ62059 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VcanQ62059 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VcanQ62059 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VcanQ62059 Matn2-203ENSMUST00000226766 3252 ntBASIC10.82□□□□□ -0.68
VcanQ62059 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VcanQ62059 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
VcanQ62059 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
VcanQ62059 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
VcanQ62059 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VcanQ62059 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VcanQ62059 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
VcanQ62059 Gm11993-201ENSMUST00000121861 820 ntBASIC10.82□□□□□ -0.68
VcanQ62059 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VcanQ62059 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC10.82□□□□□ -0.68
VcanQ62059 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
VcanQ62059 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms