Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.13□□□□□ -0.63
Sox17Q61473 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sox17Q61473 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Sox17Q61473 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.12□□□□□ -0.63
Sox17Q61473 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.12□□□□□ -0.63
Sox17Q61473 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.12□□□□□ -0.63
Sox17Q61473 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.12□□□□□ -0.63
Sox17Q61473 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.12□□□□□ -0.63
Sox17Q61473 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Sox17Q61473 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.12□□□□□ -0.63
Sox17Q61473 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 Gm23912-201ENSMUST00000104687 87 ntBASIC11.12□□□□□ -0.63
Sox17Q61473 Gm11814-201ENSMUST00000119515 929 ntBASIC11.12□□□□□ -0.63
Sox17Q61473 Gm12138-201ENSMUST00000122180 951 ntBASIC11.12□□□□□ -0.63
Sox17Q61473 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.12□□□□□ -0.63
Sox17Q61473 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Sox17Q61473 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.12□□□□□ -0.63
Sox17Q61473 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Sox17Q61473 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Sox17Q61473 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Sox17Q61473 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Sox17Q61473 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.12□□□□□ -0.63
Sox17Q61473 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Sox17Q61473 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Sox17Q61473 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox17Q61473 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.11□□□□□ -0.63
Sox17Q61473 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.11□□□□□ -0.63
Sox17Q61473 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.11□□□□□ -0.63
Sox17Q61473 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.11□□□□□ -0.63
Sox17Q61473 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Sox17Q61473 Gm14247-201ENSMUST00000120950 237 ntBASIC11.11□□□□□ -0.63
Sox17Q61473 Gm14999-201ENSMUST00000121039 624 ntBASIC11.11□□□□□ -0.63
Sox17Q61473 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Sox17Q61473 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.11□□□□□ -0.63
Sox17Q61473 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.11□□□□□ -0.63
Sox17Q61473 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 Gm5866-201ENSMUST00000177881 973 ntBASIC11.11□□□□□ -0.63
Sox17Q61473 Gm27682-201ENSMUST00000183930 110 ntBASIC11.11□□□□□ -0.63
Sox17Q61473 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.11□□□□□ -0.63
Sox17Q61473 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.11□□□□□ -0.63
Sox17Q61473 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.11□□□□□ -0.63
Sox17Q61473 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 Gm6091-201ENSMUST00000098307 165 ntBASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms