Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Col12a1Q60847 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col12a1Q60847 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Col12a1Q60847 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col12a1Q60847 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col12a1Q60847 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col12a1Q60847 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col12a1Q60847 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col12a1Q60847 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col12a1Q60847 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col12a1Q60847 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col12a1Q60847 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col12a1Q60847 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.43□□□□□ -0.58
Col12a1Q60847 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col12a1Q60847 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC11.43□□□□□ -0.58
Col12a1Q60847 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col12a1Q60847 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col12a1Q60847 Gm4705-201ENSMUST00000177415 354 ntBASIC11.43□□□□□ -0.58
Col12a1Q60847 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Col12a1Q60847 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Col12a1Q60847 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC11.43□□□□□ -0.58
Col12a1Q60847 AC154461.1-201ENSMUST00000224207 1005 ntBASIC11.43□□□□□ -0.58
Col12a1Q60847 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col12a1Q60847 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col12a1Q60847 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col12a1Q60847 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col12a1Q60847 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col12a1Q60847 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col12a1Q60847 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Col12a1Q60847 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col12a1Q60847 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col12a1Q60847 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Col12a1Q60847 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Col12a1Q60847 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Col12a1Q60847 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col12a1Q60847 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.42□□□□□ -0.58
Col12a1Q60847 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col12a1Q60847 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col12a1Q60847 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col12a1Q60847 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.42□□□□□ -0.58
Col12a1Q60847 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col12a1Q60847 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.42□□□□□ -0.58
Col12a1Q60847 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col12a1Q60847 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col12a1Q60847 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC11.42□□□□□ -0.58
Col12a1Q60847 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Col12a1Q60847 Gm7445-201ENSMUST00000192115 340 ntBASIC11.42□□□□□ -0.58
Col12a1Q60847 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC11.42□□□□□ -0.58
Col12a1Q60847 Gm9102-201ENSMUST00000219250 465 ntBASIC11.42□□□□□ -0.58
Col12a1Q60847 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Col12a1Q60847 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col12a1Q60847 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col12a1Q60847 Gm8873-201ENSMUST00000217847 1439 ntBASIC11.42□□□□□ -0.58
Col12a1Q60847 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Col12a1Q60847 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.42□□□□□ -0.58
Col12a1Q60847 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Col12a1Q60847 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col12a1Q60847 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col12a1Q60847 Gm25148-201ENSMUST00000104611 123 ntBASIC11.42□□□□□ -0.58
Col12a1Q60847 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col12a1Q60847 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC11.42□□□□□ -0.58
Col12a1Q60847 Gm25343-201ENSMUST00000157460 107 ntBASIC11.42□□□□□ -0.58
Col12a1Q60847 Gm5178-201ENSMUST00000219380 898 ntBASIC11.42□□□□□ -0.58
Col12a1Q60847 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col12a1Q60847 Klf10-203ENSMUST00000227920 2144 ntBASIC11.42□□□□□ -0.58
Col12a1Q60847 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col12a1Q60847 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col12a1Q60847 Gm6478-201ENSMUST00000099450 742 ntBASIC11.42□□□□□ -0.58
Col12a1Q60847 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.42□□□□□ -0.58
Col12a1Q60847 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col12a1Q60847 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col12a1Q60847 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Col12a1Q60847 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col12a1Q60847 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.42□□□□□ -0.58
Col12a1Q60847 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col12a1Q60847 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col12a1Q60847 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.42□□□□□ -0.58
Col12a1Q60847 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col12a1Q60847 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Col12a1Q60847 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col12a1Q60847 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC11.42□□□□□ -0.58
Col12a1Q60847 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col12a1Q60847 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col12a1Q60847 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col12a1Q60847 Gm6441-201ENSMUST00000120983 696 ntBASIC11.42□□□□□ -0.58
Col12a1Q60847 Gm15329-201ENSMUST00000121408 155 ntBASIC11.42□□□□□ -0.58
Col12a1Q60847 Gm5291-201ENSMUST00000201965 899 ntBASIC11.42□□□□□ -0.58
Col12a1Q60847 Gm6518-201ENSMUST00000208450 342 ntBASIC11.42□□□□□ -0.58
Col12a1Q60847 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Col12a1Q60847 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Col12a1Q60847 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Col12a1Q60847 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC11.41□□□□□ -0.58
Col12a1Q60847 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col12a1Q60847 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col12a1Q60847 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col12a1Q60847 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col12a1Q60847 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col12a1Q60847 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col12a1Q60847 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col12a1Q60847 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms