Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.36□□□□□ -0.59
Nr1h4Q60641 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Gm38241-201ENSMUST00000192641 898 ntBASIC11.36□□□□□ -0.59
Nr1h4Q60641 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.36□□□□□ -0.59
Nr1h4Q60641 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.36□□□□□ -0.59
Nr1h4Q60641 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.35□□□□□ -0.59
Nr1h4Q60641 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.35□□□□□ -0.59
Nr1h4Q60641 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Gm11478-201ENSMUST00000117851 599 ntBASIC11.35□□□□□ -0.59
Nr1h4Q60641 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.35□□□□□ -0.59
Nr1h4Q60641 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Gm6222-202ENSMUST00000182143 629 ntBASIC11.35□□□□□ -0.59
Nr1h4Q60641 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.35□□□□□ -0.59
Nr1h4Q60641 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Snora73a-201ENSMUST00000082453 205 ntBASIC11.35□□□□□ -0.59
Nr1h4Q60641 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.35□□□□□ -0.59
Nr1h4Q60641 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.35□□□□□ -0.59
Nr1h4Q60641 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nr1h4Q60641 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 119 ms