Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Gm27320-201ENSMUST00000184892 109 ntBASIC11.77□□□□□ -0.53
Scn2bQ56A07 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn2bQ56A07 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Scn2bQ56A07 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.77□□□□□ -0.53
Scn2bQ56A07 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.77□□□□□ -0.53
Scn2bQ56A07 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.77□□□□□ -0.53
Scn2bQ56A07 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.77□□□□□ -0.53
Scn2bQ56A07 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Scn2bQ56A07 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.77□□□□□ -0.53
Scn2bQ56A07 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn2bQ56A07 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn2bQ56A07 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn2bQ56A07 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn2bQ56A07 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn2bQ56A07 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn2bQ56A07 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn2bQ56A07 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn2bQ56A07 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.77□□□□□ -0.53
Scn2bQ56A07 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Scn2bQ56A07 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.77□□□□□ -0.53
Scn2bQ56A07 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn2bQ56A07 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn2bQ56A07 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.77□□□□□ -0.53
Scn2bQ56A07 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn2bQ56A07 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn2bQ56A07 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Scn2bQ56A07 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.76□□□□□ -0.53
Scn2bQ56A07 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Gm43758-201ENSMUST00000199500 367 ntBASIC11.76□□□□□ -0.53
Scn2bQ56A07 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.76□□□□□ -0.53
Scn2bQ56A07 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.76□□□□□ -0.53
Scn2bQ56A07 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.76□□□□□ -0.53
Scn2bQ56A07 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.76□□□□□ -0.53
Scn2bQ56A07 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.76□□□□□ -0.53
Scn2bQ56A07 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Scn2bQ56A07 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.76□□□□□ -0.53
Scn2bQ56A07 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn2bQ56A07 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.75□□□□□ -0.53
Scn2bQ56A07 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Gm13350-201ENSMUST00000120519 479 ntBASIC11.75□□□□□ -0.53
Scn2bQ56A07 Gm14726-201ENSMUST00000120623 896 ntBASIC11.75□□□□□ -0.53
Scn2bQ56A07 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.75□□□□□ -0.53
Scn2bQ56A07 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.75□□□□□ -0.53
Scn2bQ56A07 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.75□□□□□ -0.53
Scn2bQ56A07 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn2bQ56A07 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Gm17931-201ENSMUST00000208132 634 ntBASIC11.75□□□□□ -0.53
Scn2bQ56A07 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Gm9996-201ENSMUST00000070359 913 ntBASIC11.75□□□□□ -0.53
Scn2bQ56A07 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms