Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Shisa3Q3UPR0 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Shisa3Q3UPR0 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Snora73a-201ENSMUST00000082453 205 ntBASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shisa3Q3UPR0 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Gm13392-201ENSMUST00000117708 150 ntBASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Gm16420-201ENSMUST00000120258 856 ntBASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Gm13315-201ENSMUST00000120376 991 ntBASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Gm17420-201ENSMUST00000164753 153 ntBASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Gm37008-201ENSMUST00000195712 319 ntBASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Gm43438-201ENSMUST00000198133 379 ntBASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Gm6649-201ENSMUST00000199743 1165 ntBASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Gm43630-201ENSMUST00000201550 776 ntBASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Gm5178-201ENSMUST00000219380 898 ntBASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Gm24526-201ENSMUST00000082921 158 ntBASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shisa3Q3UPR0 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms