Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Gm5616-201ENSMUST00000165252 384 ntBASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Gm8741-201ENSMUST00000174736 384 ntBASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Gm9555-201ENSMUST00000200908 583 ntBASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc4Q3TCX3 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Gm24934-201ENSMUST00000103764 111 ntBASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Gm11450-201ENSMUST00000121144 333 ntBASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Gm44882-201ENSMUST00000205702 802 ntBASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms