Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Gm19046-201ENSMUST00000221263 1298 ntBASIC14.09□□□□□ -0.15
Chrna5Q2MKA5 AC154572.1-201ENSMUST00000226098 1204 ntBASIC14.09□□□□□ -0.15
Chrna5Q2MKA5 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chrna5Q2MKA5 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chrna5Q2MKA5 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chrna5Q2MKA5 Gm37600-201ENSMUST00000193764 3292 ntBASIC14.09□□□□□ -0.15
Chrna5Q2MKA5 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chrna5Q2MKA5 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chrna5Q2MKA5 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chrna5Q2MKA5 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.09□□□□□ -0.15
Chrna5Q2MKA5 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chrna5Q2MKA5 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chrna5Q2MKA5 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Chrna5Q2MKA5 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.09□□□□□ -0.15
Chrna5Q2MKA5 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Chrna5Q2MKA5 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Chrna5Q2MKA5 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chrna5Q2MKA5 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.09□□□□□ -0.15
Chrna5Q2MKA5 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.09□□□□□ -0.15
Chrna5Q2MKA5 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Chrna5Q2MKA5 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Chrna5Q2MKA5 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.08□□□□□ -0.15
Chrna5Q2MKA5 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Gm24791-201ENSMUST00000104284 131 ntBASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Gm22379-201ENSMUST00000157480 131 ntBASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Gm44647-201ENSMUST00000207402 428 ntBASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Gm8436-201ENSMUST00000210152 1080 ntBASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Gm5749-201ENSMUST00000210673 1090 ntBASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 AC154361.2-201ENSMUST00000224747 943 ntBASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 AC118639.2-201ENSMUST00000226289 223 ntBASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chrna5Q2MKA5 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Gm11560-201ENSMUST00000117567 948 ntBASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Gm11578-201ENSMUST00000118530 459 ntBASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Gm7741-201ENSMUST00000181445 989 ntBASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Gm5982-201ENSMUST00000196234 512 ntBASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 AC164618.2-201ENSMUST00000224770 573 ntBASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 CT573086.4-201ENSMUST00000226729 342 ntBASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 AC158636.1-201ENSMUST00000220118 1393 ntBASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC14.07□□□□□ -0.16
Chrna5Q2MKA5 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chrna5Q2MKA5 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chrna5Q2MKA5 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Chrna5Q2MKA5 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms