Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC12.65□□□□□ -0.38
Col19a1Q0VF58 Gm24943-201ENSMUST00000158329 433 ntBASIC12.65□□□□□ -0.38
Col19a1Q0VF58 Gm4868-201ENSMUST00000164138 789 ntBASIC12.65□□□□□ -0.38
Col19a1Q0VF58 Gm23576-201ENSMUST00000179918 110 ntBASIC12.65□□□□□ -0.38
Col19a1Q0VF58 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Col19a1Q0VF58 Gm36982-201ENSMUST00000193796 1128 ntBASIC12.65□□□□□ -0.38
Col19a1Q0VF58 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC12.65□□□□□ -0.38
Col19a1Q0VF58 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC12.65□□□□□ -0.38
Col19a1Q0VF58 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col19a1Q0VF58 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col19a1Q0VF58 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Col19a1Q0VF58 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col19a1Q0VF58 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col19a1Q0VF58 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Col19a1Q0VF58 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col19a1Q0VF58 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col19a1Q0VF58 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.65□□□□□ -0.38
Col19a1Q0VF58 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col19a1Q0VF58 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col19a1Q0VF58 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Col19a1Q0VF58 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Col19a1Q0VF58 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col19a1Q0VF58 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col19a1Q0VF58 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Col19a1Q0VF58 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Col19a1Q0VF58 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Col19a1Q0VF58 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Col19a1Q0VF58 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Gm14234-201ENSMUST00000119539 845 ntBASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Gm24078-201ENSMUST00000158184 103 ntBASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Gm7627-201ENSMUST00000183205 999 ntBASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Gm29808-201ENSMUST00000194419 468 ntBASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Gm7939-201ENSMUST00000201233 1050 ntBASIC12.64□□□□□ -0.39
Col19a1Q0VF58 BC080696-201ENSMUST00000202858 1218 ntBASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Gm7525-201ENSMUST00000219425 454 ntBASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Gm8768-201ENSMUST00000220020 826 ntBASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col19a1Q0VF58 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.63□□□□□ -0.39
Col19a1Q0VF58 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col19a1Q0VF58 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Col19a1Q0VF58 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col19a1Q0VF58 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col19a1Q0VF58 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col19a1Q0VF58 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col19a1Q0VF58 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col19a1Q0VF58 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.63□□□□□ -0.39
Col19a1Q0VF58 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col19a1Q0VF58 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col19a1Q0VF58 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Col19a1Q0VF58 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.63□□□□□ -0.39
Col19a1Q0VF58 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col19a1Q0VF58 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.63□□□□□ -0.39
Col19a1Q0VF58 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col19a1Q0VF58 Gm25562-201ENSMUST00000104608 133 ntBASIC12.63□□□□□ -0.39
Col19a1Q0VF58 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col19a1Q0VF58 Mir453-201ENSMUST00000104732 82 ntBASIC12.63□□□□□ -0.39
Col19a1Q0VF58 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col19a1Q0VF58 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col19a1Q0VF58 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col19a1Q0VF58 Gm12247-201ENSMUST00000117585 670 ntBASIC12.63□□□□□ -0.39
Col19a1Q0VF58 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.63□□□□□ -0.39
Col19a1Q0VF58 Gm5395-201ENSMUST00000121650 915 ntBASIC12.63□□□□□ -0.39
Col19a1Q0VF58 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col19a1Q0VF58 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col19a1Q0VF58 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col19a1Q0VF58 Gm25492-201ENSMUST00000157383 129 ntBASIC12.63□□□□□ -0.39
Col19a1Q0VF58 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms