Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Atf4Q06507 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.79□□□□□ -0.52
Atf4Q06507 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.79□□□□□ -0.52
Atf4Q06507 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.79□□□□□ -0.52
Atf4Q06507 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Atf4Q06507 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Atf4Q06507 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Atf4Q06507 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Atf4Q06507 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Mir124-2hg-204ENSMUST00000188983 1365 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Atf4Q06507 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.79□□□□□ -0.52
Atf4Q06507 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf4Q06507 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.78□□□□□ -0.52
Atf4Q06507 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf4Q06507 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atf4Q06507 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf4Q06507 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.78□□□□□ -0.52
Atf4Q06507 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Atf4Q06507 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf4Q06507 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atf4Q06507 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atf4Q06507 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Atf4Q06507 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf4Q06507 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Atf4Q06507 Snord83b-201ENSMUST00000104546 94 ntBASIC11.78□□□□□ -0.52
Atf4Q06507 Gm14109-201ENSMUST00000118814 309 ntBASIC11.78□□□□□ -0.52
Atf4Q06507 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.78□□□□□ -0.52
Atf4Q06507 Gm15547-201ENSMUST00000122152 333 ntBASIC11.78□□□□□ -0.52
Atf4Q06507 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.78□□□□□ -0.52
Atf4Q06507 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.78□□□□□ -0.52
Atf4Q06507 Gm22552-201ENSMUST00000157796 337 ntBASIC11.78□□□□□ -0.52
Atf4Q06507 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atf4Q06507 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Atf4Q06507 Gm27023-201ENSMUST00000182372 285 ntBASIC11.78□□□□□ -0.52
Atf4Q06507 Gm20574-201ENSMUST00000182867 917 ntBASIC11.78□□□□□ -0.52
Atf4Q06507 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf4Q06507 Gm38233-201ENSMUST00000194259 807 ntBASIC11.78□□□□□ -0.52
Atf4Q06507 Gm19931-201ENSMUST00000198920 368 ntBASIC11.78□□□□□ -0.52
Atf4Q06507 Gm18290-201ENSMUST00000202900 844 ntBASIC11.78□□□□□ -0.52
Atf4Q06507 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.78□□□□□ -0.52
Atf4Q06507 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.78□□□□□ -0.52
Atf4Q06507 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.78□□□□□ -0.52
Atf4Q06507 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.78□□□□□ -0.52
Atf4Q06507 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Atf4Q06507 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.78□□□□□ -0.52
Atf4Q06507 AC123738.1-201ENSMUST00000224796 773 ntBASIC11.78□□□□□ -0.52
Atf4Q06507 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC11.78□□□□□ -0.52
Atf4Q06507 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf4Q06507 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Atf4Q06507 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atf4Q06507 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.78□□□□□ -0.52
Atf4Q06507 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Atf4Q06507 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf4Q06507 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.78□□□□□ -0.52
Atf4Q06507 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf4Q06507 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atf4Q06507 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atf4Q06507 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atf4Q06507 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atf4Q06507 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atf4Q06507 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atf4Q06507 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atf4Q06507 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.77□□□□□ -0.52
Atf4Q06507 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atf4Q06507 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atf4Q06507 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.77□□□□□ -0.52
Atf4Q06507 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.77□□□□□ -0.52
Atf4Q06507 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atf4Q06507 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atf4Q06507 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atf4Q06507 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atf4Q06507 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.77□□□□□ -0.53
Atf4Q06507 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atf4Q06507 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Atf4Q06507 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atf4Q06507 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC11.77□□□□□ -0.53
Atf4Q06507 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atf4Q06507 Gm12616-201ENSMUST00000118594 382 ntBASIC11.77□□□□□ -0.53
Atf4Q06507 Gm15403-201ENSMUST00000119343 1227 ntBASIC11.77□□□□□ -0.53
Atf4Q06507 Gm14417-201ENSMUST00000120036 1074 ntBASIC11.77□□□□□ -0.53
Atf4Q06507 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms