Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Gm10263-201ENSMUST00000085163 300 ntBASIC14.89□□□□□ -0.03
Nkx2-3P97334 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.89□□□□□ -0.03
Nkx2-3P97334 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC14.89□□□□□ -0.03
Nkx2-3P97334 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-3P97334 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-3P97334 Gm13615-201ENSMUST00000120242 1612 ntBASIC14.88□□□□□ -0.03
Nkx2-3P97334 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14.88□□□□□ -0.03
Nkx2-3P97334 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-3P97334 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-3P97334 AC130823.1-201ENSMUST00000228929 1549 ntBASIC14.88□□□□□ -0.03
Nkx2-3P97334 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-3P97334 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Nkx2-3P97334 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Nkx2-3P97334 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-3P97334 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.88□□□□□ -0.03
Nkx2-3P97334 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-3P97334 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC14.88□□□□□ -0.03
Nkx2-3P97334 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC14.88□□□□□ -0.03
Nkx2-3P97334 Gm15329-201ENSMUST00000121408 155 ntBASIC14.88□□□□□ -0.03
Nkx2-3P97334 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC14.88□□□□□ -0.03
Nkx2-3P97334 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-3P97334 Gm45120-201ENSMUST00000208880 408 ntBASIC14.88□□□□□ -0.03
Nkx2-3P97334 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC14.88□□□□□ -0.03
Nkx2-3P97334 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Nkx2-3P97334 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-3P97334 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-3P97334 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-3P97334 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-3P97334 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.88□□□□□ -0.03
Nkx2-3P97334 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.88□□□□□ -0.03
Nkx2-3P97334 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-3P97334 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-3P97334 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-3P97334 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Nkx2-3P97334 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC14.87□□□□□ -0.03
Nkx2-3P97334 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Nkx2-3P97334 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-3P97334 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-3P97334 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-3P97334 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-3P97334 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-3P97334 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Nkx2-3P97334 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14.87□□□□□ -0.03
Nkx2-3P97334 Gm25148-201ENSMUST00000104611 123 ntBASIC14.87□□□□□ -0.03
Nkx2-3P97334 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Nkx2-3P97334 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC14.87□□□□□ -0.03
Nkx2-3P97334 Gm12969-201ENSMUST00000120199 1004 ntBASIC14.87□□□□□ -0.03
Nkx2-3P97334 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC14.87□□□□□ -0.03
Nkx2-3P97334 Gm19015-201ENSMUST00000184002 1189 ntBASIC14.87□□□□□ -0.03
Nkx2-3P97334 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Nkx2-3P97334 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-3P97334 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC14.87□□□□□ -0.03
Nkx2-3P97334 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC14.87□□□□□ -0.03
Nkx2-3P97334 AC124433.1-201ENSMUST00000224483 1063 ntBASIC14.87□□□□□ -0.03
Nkx2-3P97334 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-3P97334 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Nkx2-3P97334 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Nkx2-3P97334 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Nkx2-3P97334 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-3P97334 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-3P97334 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.87□□□□□ -0.03
Nkx2-3P97334 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-3P97334 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-3P97334 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
Nkx2-3P97334 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-3P97334 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Nkx2-3P97334 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Nkx2-3P97334 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-3P97334 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.86□□□□□ -0.03
Nkx2-3P97334 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-3P97334 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-3P97334 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-3P97334 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Nkx2-3P97334 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms