Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp46P62069 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp46P62069 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp46P62069 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Usp46P62069 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Usp46P62069 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Usp46P62069 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp46P62069 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.68□□□□□ -0.38
Usp46P62069 Gm6461-201ENSMUST00000120015 633 ntBASIC12.68□□□□□ -0.38
Usp46P62069 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.68□□□□□ -0.38
Usp46P62069 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp46P62069 Gm16112-201ENSMUST00000159075 382 ntBASIC12.68□□□□□ -0.38
Usp46P62069 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp46P62069 Gm17040-202ENSMUST00000170597 889 ntBASIC12.68□□□□□ -0.38
Usp46P62069 Gm9630-201ENSMUST00000178304 885 ntBASIC12.68□□□□□ -0.38
Usp46P62069 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
Usp46P62069 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.68□□□□□ -0.38
Usp46P62069 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC12.68□□□□□ -0.38
Usp46P62069 Gm6562-201ENSMUST00000221903 464 ntBASIC12.68□□□□□ -0.38
Usp46P62069 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp46P62069 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp46P62069 Manf-201ENSMUST00000069036 960 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Usp46P62069 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp46P62069 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.68□□□□□ -0.38
Usp46P62069 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.68□□□□□ -0.38
Usp46P62069 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Usp46P62069 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp46P62069 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp46P62069 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Usp46P62069 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp46P62069 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp46P62069 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Usp46P62069 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Usp46P62069 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp46P62069 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp46P62069 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp46P62069 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp46P62069 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.67□□□□□ -0.38
Usp46P62069 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.67□□□□□ -0.38
Usp46P62069 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp46P62069 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.67□□□□□ -0.38
Usp46P62069 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.67□□□□□ -0.38
Usp46P62069 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Usp46P62069 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp46P62069 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Usp46P62069 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp46P62069 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.67□□□□□ -0.38
Usp46P62069 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.67□□□□□ -0.38
Usp46P62069 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp46P62069 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp46P62069 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Usp46P62069 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Usp46P62069 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.67□□□□□ -0.38
Usp46P62069 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp46P62069 Gm16044-201ENSMUST00000118475 450 ntBASIC12.67□□□□□ -0.38
Usp46P62069 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.67□□□□□ -0.38
Usp46P62069 Gm12566-201ENSMUST00000121479 359 ntBASIC12.67□□□□□ -0.38
Usp46P62069 Gm12001-201ENSMUST00000121727 913 ntBASIC12.67□□□□□ -0.38
Usp46P62069 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp46P62069 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC12.67□□□□□ -0.38
Usp46P62069 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
Usp46P62069 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.67□□□□□ -0.38
Usp46P62069 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp46P62069 Gm18352-201ENSMUST00000189113 902 ntBASIC12.67□□□□□ -0.38
Usp46P62069 Gm28071-201ENSMUST00000190355 478 ntBASIC12.67□□□□□ -0.38
Usp46P62069 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC12.67□□□□□ -0.38
Usp46P62069 Gm43138-201ENSMUST00000199123 708 ntBASIC12.67□□□□□ -0.38
Usp46P62069 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.67□□□□□ -0.38
Usp46P62069 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.67□□□□□ -0.38
Usp46P62069 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.67□□□□□ -0.38
Usp46P62069 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp46P62069 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp46P62069 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC12.67□□□□□ -0.38
Usp46P62069 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Usp46P62069 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp46P62069 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp46P62069 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp46P62069 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Usp46P62069 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Usp46P62069 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Usp46P62069 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp46P62069 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp46P62069 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp46P62069 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.67□□□□□ -0.38
Usp46P62069 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp46P62069 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp46P62069 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp46P62069 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp46P62069 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp46P62069 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp46P62069 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp46P62069 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp46P62069 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Usp46P62069 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp46P62069 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp46P62069 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Usp46P62069 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp46P62069 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp46P62069 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp46P62069 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms