Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Sfxn2-201ENSMUST00000026011 3210 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cks1bP61025 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cks1bP61025 Igf2bp3-201ENSMUST00000031838 4345 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cks1bP61025 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cks1bP61025 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cks1bP61025 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cks1bP61025 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Cks1bP61025 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cks1bP61025 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC8.53□□□□□ -1.04
Cks1bP61025 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cks1bP61025 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
Cks1bP61025 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC8.53□□□□□ -1.04
Cks1bP61025 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cks1bP61025 Gm44124-201ENSMUST00000204159 472 ntBASIC8.53□□□□□ -1.04
Cks1bP61025 Gm44069-201ENSMUST00000204898 506 ntBASIC8.53□□□□□ -1.04
Cks1bP61025 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC8.53□□□□□ -1.04
Cks1bP61025 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC8.53□□□□□ -1.04
Cks1bP61025 Hist1h2al-201ENSMUST00000091708 339 ntBASIC8.53□□□□□ -1.04
Cks1bP61025 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cks1bP61025 Gm38054-201ENSMUST00000192380 2167 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cks1bP61025 Tnip1-205ENSMUST00000108886 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cks1bP61025 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
Cks1bP61025 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cks1bP61025 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cks1bP61025 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cks1bP61025 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cks1bP61025 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cks1bP61025 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC8.53□□□□□ -1.04
Cks1bP61025 Gm15544-201ENSMUST00000118776 1531 ntBASIC8.53□□□□□ -1.04
Cks1bP61025 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
Cks1bP61025 Stau1-202ENSMUST00000109235 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cks1bP61025 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cks1bP61025 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cks1bP61025 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Cks1bP61025 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC8.53□□□□□ -1.04
Cks1bP61025 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cks1bP61025 Gm2420-201ENSMUST00000119864 2149 ntBASIC8.53□□□□□ -1.04
Cks1bP61025 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC8.53□□□□□ -1.04
Cks1bP61025 Gm45889-202ENSMUST00000211255 2358 ntTSL 5 BASIC8.53□□□□□ -1.04
Cks1bP61025 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC8.52□□□□□ -1.04
Cks1bP61025 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.04
Cks1bP61025 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Cks1bP61025 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.04
Cks1bP61025 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Cks1bP61025 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Cks1bP61025 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.04
Cks1bP61025 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Cks1bP61025 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC8.52□□□□□ -1.05
Cks1bP61025 Gm19327-201ENSMUST00000220651 3271 ntBASIC8.52□□□□□ -1.05
Cks1bP61025 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Mmp9-201ENSMUST00000017881 3175 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC8.52□□□□□ -1.05
Cks1bP61025 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC8.52□□□□□ -1.05
Cks1bP61025 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC8.52□□□□□ -1.05
Cks1bP61025 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Cks1bP61025 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC8.52□□□□□ -1.05
Cks1bP61025 Gm11978-201ENSMUST00000122315 466 ntBASIC8.52□□□□□ -1.05
Cks1bP61025 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC8.52□□□□□ -1.05
Cks1bP61025 AC132863.2-201ENSMUST00000226643 799 ntBASIC8.52□□□□□ -1.05
Cks1bP61025 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC8.52□□□□□ -1.05
Cks1bP61025 Gm45776-201ENSMUST00000212366 1522 ntBASIC8.52□□□□□ -1.05
Cks1bP61025 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Cks1bP61025 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC8.52□□□□□ -1.05
Cks1bP61025 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Cks1bP61025 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Gm6263-201ENSMUST00000120029 1342 ntBASIC8.52□□□□□ -1.05
Cks1bP61025 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC8.52□□□□□ -1.05
Cks1bP61025 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Cks1bP61025 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cks1bP61025 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Cks1bP61025 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC8.51□□□□□ -1.05
Cks1bP61025 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms