Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sf3b6P59708 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sf3b6P59708 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Sf3b6P59708 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
Sf3b6P59708 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sf3b6P59708 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sf3b6P59708 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
Sf3b6P59708 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.58□□□□□ -0.72
Sf3b6P59708 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.58□□□□□ -0.72
Sf3b6P59708 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Sf3b6P59708 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Sf3b6P59708 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Sf3b6P59708 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.58□□□□□ -0.72
Sf3b6P59708 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Sf3b6P59708 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.58□□□□□ -0.72
Sf3b6P59708 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.58□□□□□ -0.72
Sf3b6P59708 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.58□□□□□ -0.72
Sf3b6P59708 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Gm14441-201ENSMUST00000121960 540 ntBASIC10.58□□□□□ -0.72
Sf3b6P59708 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Gm27682-201ENSMUST00000183930 110 ntBASIC10.58□□□□□ -0.72
Sf3b6P59708 Gm5370-201ENSMUST00000187187 574 ntBASIC10.58□□□□□ -0.72
Sf3b6P59708 CT010431.1-201ENSMUST00000221249 1080 ntBASIC10.58□□□□□ -0.72
Sf3b6P59708 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.58□□□□□ -0.72
Sf3b6P59708 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
Sf3b6P59708 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.58□□□□□ -0.72
Sf3b6P59708 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Sf3b6P59708 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.58□□□□□ -0.72
Sf3b6P59708 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Sf3b6P59708 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sf3b6P59708 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
Sf3b6P59708 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.58□□□□□ -0.72
Sf3b6P59708 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Sf3b6P59708 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.57□□□□□ -0.72
Sf3b6P59708 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Sf3b6P59708 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Sf3b6P59708 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Sf3b6P59708 Gm12957-201ENSMUST00000117835 377 ntBASIC10.57□□□□□ -0.72
Sf3b6P59708 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Sf3b6P59708 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.57□□□□□ -0.72
Sf3b6P59708 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.57□□□□□ -0.72
Sf3b6P59708 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.57□□□□□ -0.72
Sf3b6P59708 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Sf3b6P59708 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Sf3b6P59708 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.57□□□□□ -0.72
Sf3b6P59708 Gm18711-201ENSMUST00000199341 750 ntBASIC10.57□□□□□ -0.72
Sf3b6P59708 Gm17931-201ENSMUST00000208132 634 ntBASIC10.57□□□□□ -0.72
Sf3b6P59708 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.57□□□□□ -0.72
Sf3b6P59708 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms