Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lim2P56563 Gm8956-201ENSMUST00000203939 825 ntBASIC11.91□□□□□ -0.5
Lim2P56563 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.91□□□□□ -0.5
Lim2P56563 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.91□□□□□ -0.5
Lim2P56563 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lim2P56563 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lim2P56563 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.91□□□□□ -0.5
Lim2P56563 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lim2P56563 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lim2P56563 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lim2P56563 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.91□□□□□ -0.5
Lim2P56563 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lim2P56563 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lim2P56563 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.91□□□□□ -0.5
Lim2P56563 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lim2P56563 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lim2P56563 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lim2P56563 Paupar-201ENSMUST00000194826 3482 ntBASIC11.91□□□□□ -0.5
Lim2P56563 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lim2P56563 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lim2P56563 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lim2P56563 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Lim2P56563 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lim2P56563 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lim2P56563 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lim2P56563 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lim2P56563 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lim2P56563 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lim2P56563 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lim2P56563 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lim2P56563 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lim2P56563 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.9□□□□□ -0.5
Lim2P56563 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lim2P56563 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lim2P56563 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lim2P56563 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Lim2P56563 Gm26286-201ENSMUST00000104166 134 ntBASIC11.9□□□□□ -0.5
Lim2P56563 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.9□□□□□ -0.5
Lim2P56563 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lim2P56563 Gm12217-201ENSMUST00000118858 696 ntBASIC11.9□□□□□ -0.5
Lim2P56563 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lim2P56563 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.9□□□□□ -0.5
Lim2P56563 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lim2P56563 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.9□□□□□ -0.5
Lim2P56563 Gm18038-201ENSMUST00000197900 485 ntBASIC11.9□□□□□ -0.5
Lim2P56563 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lim2P56563 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.9□□□□□ -0.5
Lim2P56563 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.9□□□□□ -0.5
Lim2P56563 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lim2P56563 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lim2P56563 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lim2P56563 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lim2P56563 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Lim2P56563 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lim2P56563 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lim2P56563 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.9□□□□□ -0.5
Lim2P56563 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Lim2P56563 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lim2P56563 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lim2P56563 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lim2P56563 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lim2P56563 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.9□□□□□ -0.5
Lim2P56563 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lim2P56563 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.9□□□□□ -0.5
Lim2P56563 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lim2P56563 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Lim2P56563 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.9□□□□□ -0.51
Lim2P56563 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Lim2P56563 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.51
Lim2P56563 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lim2P56563 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lim2P56563 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lim2P56563 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lim2P56563 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Lim2P56563 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Lim2P56563 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lim2P56563 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Lim2P56563 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lim2P56563 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lim2P56563 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.89□□□□□ -0.51
Lim2P56563 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Lim2P56563 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lim2P56563 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Lim2P56563 Gm17040-202ENSMUST00000170597 889 ntBASIC11.89□□□□□ -0.51
Lim2P56563 Mir7677-201ENSMUST00000184226 67 ntBASIC11.89□□□□□ -0.51
Lim2P56563 Mir6927-201ENSMUST00000184494 71 ntBASIC11.89□□□□□ -0.51
Lim2P56563 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Lim2P56563 Rps4l-202ENSMUST00000204242 789 ntBASIC11.89□□□□□ -0.51
Lim2P56563 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
Lim2P56563 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.89□□□□□ -0.51
Lim2P56563 Gm270-201ENSMUST00000223010 976 ntBASIC11.89□□□□□ -0.51
Lim2P56563 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lim2P56563 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lim2P56563 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lim2P56563 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lim2P56563 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lim2P56563 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lim2P56563 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Lim2P56563 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Lim2P56563 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms