Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nub1P54729 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nub1P54729 Gm45186-201ENSMUST00000206874 478 ntBASIC12.87□□□□□ -0.35
Nub1P54729 Gm17931-201ENSMUST00000208132 634 ntBASIC12.87□□□□□ -0.35
Nub1P54729 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nub1P54729 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nub1P54729 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nub1P54729 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nub1P54729 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nub1P54729 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nub1P54729 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Nub1P54729 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nub1P54729 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nub1P54729 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nub1P54729 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nub1P54729 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nub1P54729 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nub1P54729 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nub1P54729 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nub1P54729 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nub1P54729 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.86□□□□□ -0.35
Nub1P54729 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.86□□□□□ -0.35
Nub1P54729 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nub1P54729 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nub1P54729 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nub1P54729 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.86□□□□□ -0.35
Nub1P54729 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nub1P54729 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Nub1P54729 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nub1P54729 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nub1P54729 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nub1P54729 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Nub1P54729 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Nub1P54729 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nub1P54729 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nub1P54729 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nub1P54729 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.86□□□□□ -0.35
Nub1P54729 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Nub1P54729 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.86□□□□□ -0.35
Nub1P54729 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nub1P54729 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nub1P54729 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.86□□□□□ -0.35
Nub1P54729 Gm37666-201ENSMUST00000194110 866 ntBASIC12.86□□□□□ -0.35
Nub1P54729 Gm7003-201ENSMUST00000195089 312 ntBASIC12.86□□□□□ -0.35
Nub1P54729 Gm43962-201ENSMUST00000203898 190 ntBASIC12.86□□□□□ -0.35
Nub1P54729 Gm17812-201ENSMUST00000204935 318 ntBASIC12.86□□□□□ -0.35
Nub1P54729 Gm19324-201ENSMUST00000213229 1169 ntBASIC12.86□□□□□ -0.35
Nub1P54729 Gm2594-201ENSMUST00000214774 742 ntBASIC12.86□□□□□ -0.35
Nub1P54729 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.86□□□□□ -0.35
Nub1P54729 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nub1P54729 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nub1P54729 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nub1P54729 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nub1P54729 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.86□□□□□ -0.35
Nub1P54729 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Nub1P54729 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Nub1P54729 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nub1P54729 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nub1P54729 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nub1P54729 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nub1P54729 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.86□□□□□ -0.35
Nub1P54729 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nub1P54729 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.86□□□□□ -0.35
Nub1P54729 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nub1P54729 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.86□□□□□ -0.35
Nub1P54729 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.86□□□□□ -0.35
Nub1P54729 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nub1P54729 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.86□□□□□ -0.35
Nub1P54729 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Nub1P54729 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Nub1P54729 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Nub1P54729 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.85□□□□□ -0.35
Nub1P54729 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Nub1P54729 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.85□□□□□ -0.35
Nub1P54729 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.85□□□□□ -0.35
Nub1P54729 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.85□□□□□ -0.35
Nub1P54729 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.85□□□□□ -0.35
Nub1P54729 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms