Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Msh6P54276 AC154517.2-201ENSMUST00000220829 2458 ntBASIC15.02□□□□□ -0.01
Msh6P54276 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Msh6P54276 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Msh6P54276 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Msh6P54276 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Msh6P54276 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Msh6P54276 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Msh6P54276 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Msh6P54276 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Msh6P54276 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Msh6P54276 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh6P54276 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh6P54276 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Msh6P54276 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC15.01□□□□□ -0.01
Msh6P54276 AC157950.1-201ENSMUST00000217561 2168 ntBASIC15.01□□□□□ -0.01
Msh6P54276 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh6P54276 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Msh6P54276 Gm25766-201ENSMUST00000104101 131 ntBASIC15.01□□□□□ -0.01
Msh6P54276 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Msh6P54276 Gm7150-201ENSMUST00000122032 981 ntBASIC15.01□□□□□ -0.01
Msh6P54276 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC15.01□□□□□ -0.01
Msh6P54276 Gm24398-201ENSMUST00000157870 109 ntBASIC15.01□□□□□ -0.01
Msh6P54276 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC15.01□□□□□ -0.01
Msh6P54276 Gm8459-201ENSMUST00000162504 760 ntBASIC15.01□□□□□ -0.01
Msh6P54276 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Msh6P54276 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Msh6P54276 Gm43852-201ENSMUST00000202098 917 ntBASIC15.01□□□□□ -0.01
Msh6P54276 AC102368.1-201ENSMUST00000227161 892 ntBASIC15.01□□□□□ -0.01
Msh6P54276 AC156031.2-201ENSMUST00000213107 3310 ntBASIC15.01□□□□□ -0.01
Msh6P54276 Gm43760-201ENSMUST00000202120 3015 ntBASIC15.01□□□□□ -0.01
Msh6P54276 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh6P54276 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Msh6P54276 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Msh6P54276 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh6P54276 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh6P54276 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Msh6P54276 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh6P54276 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC15.01□□□□□ -0.01
Msh6P54276 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh6P54276 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh6P54276 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh6P54276 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Msh6P54276 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh6P54276 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Msh6P54276 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Msh6P54276 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msh6P54276 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Msh6P54276 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msh6P54276 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msh6P54276 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Msh6P54276 Gm11960-201ENSMUST00000122068 925 ntBASIC15□□□□□ -0.01
Msh6P54276 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Msh6P54276 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC15□□□□□ -0.01
Msh6P54276 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC15□□□□□ -0.01
Msh6P54276 Gm43692-201ENSMUST00000198236 1062 ntBASIC15□□□□□ -0.01
Msh6P54276 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC15□□□□□ -0.01
Msh6P54276 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC15□□□□□ -0.01
Msh6P54276 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Msh6P54276 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Msh6P54276 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Msh6P54276 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msh6P54276 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Msh6P54276 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msh6P54276 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msh6P54276 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msh6P54276 AC166836.1-201ENSMUST00000219933 1795 ntBASIC15□□□□□ -0.01
Msh6P54276 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msh6P54276 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC15□□□□□ -0.01
Msh6P54276 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC15□□□□□ -0.01
Msh6P54276 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC15□□□□□ -0.01
Msh6P54276 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
Msh6P54276 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msh6P54276 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msh6P54276 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Msh6P54276 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC15□□□□□ -0.01
Msh6P54276 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC15□□□□□ -0.01
Msh6P54276 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Msh6P54276 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msh6P54276 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Msh6P54276 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msh6P54276 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Msh6P54276 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Msh6P54276 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.99□□□□□ -0.01
Msh6P54276 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Msh6P54276 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.99□□□□□ -0.01
Msh6P54276 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msh6P54276 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msh6P54276 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msh6P54276 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Msh6P54276 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC14.99□□□□□ -0.01
Msh6P54276 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Msh6P54276 Gm11422-201ENSMUST00000118925 1103 ntBASIC14.99□□□□□ -0.01
Msh6P54276 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msh6P54276 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Msh6P54276 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC14.99□□□□□ -0.01
Msh6P54276 Gm26134-201ENSMUST00000178484 110 ntBASIC14.99□□□□□ -0.01
Msh6P54276 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC14.99□□□□□ -0.01
Msh6P54276 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC14.99□□□□□ -0.01
Msh6P54276 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms