Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 Gm23769-201ENSMUST00000104441 121 ntBASIC12.18□□□□□ -0.46
Sox1P53783 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC12.18□□□□□ -0.46
Sox1P53783 Gm15615-201ENSMUST00000118876 198 ntBASIC12.18□□□□□ -0.46
Sox1P53783 Gm15196-201ENSMUST00000121406 482 ntBASIC12.18□□□□□ -0.46
Sox1P53783 Gm9089-201ENSMUST00000122027 526 ntBASIC12.18□□□□□ -0.46
Sox1P53783 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sox1P53783 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 Gm25116-201ENSMUST00000157191 122 ntBASIC12.18□□□□□ -0.46
Sox1P53783 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.18□□□□□ -0.46
Sox1P53783 Gm43163-201ENSMUST00000196571 442 ntBASIC12.18□□□□□ -0.46
Sox1P53783 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 Gm43249-201ENSMUST00000200464 458 ntBASIC12.18□□□□□ -0.46
Sox1P53783 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Sox1P53783 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC12.18□□□□□ -0.46
Sox1P53783 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC12.18□□□□□ -0.46
Sox1P53783 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC12.18□□□□□ -0.46
Sox1P53783 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.18□□□□□ -0.46
Sox1P53783 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.18□□□□□ -0.46
Sox1P53783 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sox1P53783 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sox1P53783 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.18□□□□□ -0.46
Sox1P53783 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Sox1P53783 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.18□□□□□ -0.46
Sox1P53783 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sox1P53783 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.18□□□□□ -0.46
Sox1P53783 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Sox1P53783 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox1P53783 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.17□□□□□ -0.46
Sox1P53783 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox1P53783 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox1P53783 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox1P53783 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sox1P53783 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox1P53783 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox1P53783 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox1P53783 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox1P53783 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sox1P53783 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox1P53783 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox1P53783 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox1P53783 Gm13192-201ENSMUST00000101199 208 ntBASIC12.17□□□□□ -0.46
Sox1P53783 Gm13094-201ENSMUST00000117930 409 ntBASIC12.17□□□□□ -0.46
Sox1P53783 Gm10443-201ENSMUST00000119024 210 ntBASIC12.17□□□□□ -0.46
Sox1P53783 Gm5419-201ENSMUST00000119301 527 ntBASIC12.17□□□□□ -0.46
Sox1P53783 Gm15815-201ENSMUST00000120569 255 ntBASIC12.17□□□□□ -0.46
Sox1P53783 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox1P53783 Gm25554-201ENSMUST00000158075 113 ntBASIC12.17□□□□□ -0.46
Sox1P53783 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sox1P53783 Gm38117-201ENSMUST00000194653 939 ntBASIC12.17□□□□□ -0.46
Sox1P53783 Gm20568-201ENSMUST00000197129 208 ntBASIC12.17□□□□□ -0.46
Sox1P53783 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC12.17□□□□□ -0.46
Sox1P53783 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC12.17□□□□□ -0.46
Sox1P53783 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.17□□□□□ -0.46
Sox1P53783 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC12.17□□□□□ -0.46
Sox1P53783 AC158392.3-201ENSMUST00000224271 1284 ntBASIC12.17□□□□□ -0.46
Sox1P53783 AC169511.1-201ENSMUST00000227639 995 ntBASIC12.17□□□□□ -0.46
Sox1P53783 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox1P53783 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Sox1P53783 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox1P53783 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Sox1P53783 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox1P53783 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox1P53783 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox1P53783 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox1P53783 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox1P53783 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sox1P53783 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox1P53783 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox1P53783 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.17□□□□□ -0.46
Sox1P53783 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Sox1P53783 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sox1P53783 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox1P53783 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox1P53783 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sox1P53783 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox1P53783 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox1P53783 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox1P53783 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.16□□□□□ -0.46
Sox1P53783 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox1P53783 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms