Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hist1h1dP43277 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.06□□□□□ -0.8
Hist1h1dP43277 Gm12390-201ENSMUST00000117897 397 ntBASIC10.06□□□□□ -0.8
Hist1h1dP43277 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.06□□□□□ -0.8
Hist1h1dP43277 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.06□□□□□ -0.8
Hist1h1dP43277 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.06□□□□□ -0.8
Hist1h1dP43277 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.06□□□□□ -0.8
Hist1h1dP43277 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.06□□□□□ -0.8
Hist1h1dP43277 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hist1h1dP43277 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
Hist1h1dP43277 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hist1h1dP43277 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Hist1h1dP43277 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Hist1h1dP43277 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hist1h1dP43277 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hist1h1dP43277 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Hist1h1dP43277 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hist1h1dP43277 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hist1h1dP43277 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hist1h1dP43277 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.06□□□□□ -0.8
Hist1h1dP43277 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Hist1h1dP43277 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.06□□□□□ -0.8
Hist1h1dP43277 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hist1h1dP43277 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hist1h1dP43277 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.06□□□□□ -0.8
Hist1h1dP43277 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hist1h1dP43277 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hist1h1dP43277 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.06□□□□□ -0.8
Hist1h1dP43277 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hist1h1dP43277 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hist1h1dP43277 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hist1h1dP43277 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hist1h1dP43277 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hist1h1dP43277 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.05□□□□□ -0.8
Hist1h1dP43277 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.05□□□□□ -0.8
Hist1h1dP43277 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hist1h1dP43277 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Hist1h1dP43277 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.05□□□□□ -0.8
Hist1h1dP43277 Gm10434-201ENSMUST00000101158 471 ntBASIC10.05□□□□□ -0.8
Hist1h1dP43277 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Mir1247-201ENSMUST00000116706 82 ntBASIC10.05□□□□□ -0.8
Hist1h1dP43277 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.05□□□□□ -0.8
Hist1h1dP43277 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Gm14832-201ENSMUST00000121289 322 ntBASIC10.05□□□□□ -0.8
Hist1h1dP43277 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Gm25043-201ENSMUST00000158604 212 ntBASIC10.05□□□□□ -0.8
Hist1h1dP43277 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.05□□□□□ -0.8
Hist1h1dP43277 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.05□□□□□ -0.8
Hist1h1dP43277 Gm6114-201ENSMUST00000182472 968 ntBASIC10.05□□□□□ -0.8
Hist1h1dP43277 Gm2546-201ENSMUST00000182630 991 ntBASIC10.05□□□□□ -0.8
Hist1h1dP43277 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.05□□□□□ -0.8
Hist1h1dP43277 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.05□□□□□ -0.8
Hist1h1dP43277 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hist1h1dP43277 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.05□□□□□ -0.8
Hist1h1dP43277 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hist1h1dP43277 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Hist1h1dP43277 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Hist1h1dP43277 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.04□□□□□ -0.8
Hist1h1dP43277 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hist1h1dP43277 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Hist1h1dP43277 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hist1h1dP43277 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hist1h1dP43277 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hist1h1dP43277 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hist1h1dP43277 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.04□□□□□ -0.8
Hist1h1dP43277 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hist1h1dP43277 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.04□□□□□ -0.8
Hist1h1dP43277 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hist1h1dP43277 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.04□□□□□ -0.8
Hist1h1dP43277 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.04□□□□□ -0.8
Hist1h1dP43277 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.04□□□□□ -0.8
Hist1h1dP43277 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms