Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HttP42859 Pvalb-202ENSMUST00000120592 953 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HttP42859 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
HttP42859 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
HttP42859 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC12.26□□□□□ -0.45
HttP42859 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC12.26□□□□□ -0.45
HttP42859 Gm7589-201ENSMUST00000085631 534 ntBASIC12.26□□□□□ -0.45
HttP42859 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HttP42859 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HttP42859 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HttP42859 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HttP42859 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HttP42859 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HttP42859 Gm13426-201ENSMUST00000117887 795 ntBASIC12.26□□□□□ -0.45
HttP42859 Gm6859-201ENSMUST00000218614 989 ntBASIC12.26□□□□□ -0.45
HttP42859 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HttP42859 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
HttP42859 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HttP42859 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
HttP42859 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC12.25□□□□□ -0.45
HttP42859 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HttP42859 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HttP42859 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HttP42859 Mir3100-201ENSMUST00000174918 65 ntBASIC12.25□□□□□ -0.45
HttP42859 Gm26119-201ENSMUST00000175601 104 ntBASIC12.25□□□□□ -0.45
HttP42859 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC12.25□□□□□ -0.45
HttP42859 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HttP42859 Gm37284-201ENSMUST00000193607 539 ntBASIC12.25□□□□□ -0.45
HttP42859 Gm6352-201ENSMUST00000203583 1134 ntBASIC12.25□□□□□ -0.45
HttP42859 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HttP42859 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC12.25□□□□□ -0.45
HttP42859 Cbx3-ps2-201ENSMUST00000099421 544 ntBASIC12.25□□□□□ -0.45
HttP42859 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HttP42859 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HttP42859 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HttP42859 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HttP42859 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12.25□□□□□ -0.45
HttP42859 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.25□□□□□ -0.45
HttP42859 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HttP42859 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.25□□□□□ -0.45
HttP42859 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HttP42859 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HttP42859 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
HttP42859 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HttP42859 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HttP42859 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HttP42859 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HttP42859 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HttP42859 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HttP42859 Gm44740-201ENSMUST00000205603 1614 ntBASIC12.24□□□□□ -0.45
HttP42859 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
HttP42859 Gm12745-201ENSMUST00000121767 214 ntBASIC12.24□□□□□ -0.45
HttP42859 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC12.24□□□□□ -0.45
HttP42859 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HttP42859 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HttP42859 Gm6114-201ENSMUST00000182472 968 ntBASIC12.24□□□□□ -0.45
HttP42859 Ighv5-1-201ENSMUST00000193324 353 ntBASIC12.24□□□□□ -0.45
HttP42859 Gm6794-201ENSMUST00000203829 457 ntBASIC12.24□□□□□ -0.45
HttP42859 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HttP42859 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HttP42859 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HttP42859 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HttP42859 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HttP42859 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.24□□□□□ -0.45
HttP42859 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HttP42859 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
HttP42859 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HttP42859 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HttP42859 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HttP42859 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HttP42859 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HttP42859 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HttP42859 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.24□□□□□ -0.45
HttP42859 Gm14699-201ENSMUST00000122340 228 ntBASIC12.24□□□□□ -0.45
HttP42859 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC12.24□□□□□ -0.45
HttP42859 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HttP42859 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HttP42859 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.24□□□□□ -0.45
HttP42859 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HttP42859 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
HttP42859 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HttP42859 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HttP42859 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
HttP42859 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
HttP42859 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
HttP42859 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
HttP42859 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HttP42859 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
HttP42859 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.24□□□□□ -0.45
HttP42859 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.24□□□□□ -0.45
HttP42859 Gm8659-201ENSMUST00000120024 1084 ntBASIC12.24□□□□□ -0.45
HttP42859 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
HttP42859 Gm38145-201ENSMUST00000192319 693 ntBASIC12.24□□□□□ -0.45
HttP42859 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC12.24□□□□□ -0.45
HttP42859 Cacna2d3-208ENSMUST00000225985 918 ntBASIC12.24□□□□□ -0.45
HttP42859 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
HttP42859 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HttP42859 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
HttP42859 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HttP42859 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms