Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rab5cP35278 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rab5cP35278 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rab5cP35278 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rab5cP35278 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rab5cP35278 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rab5cP35278 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rab5cP35278 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rab5cP35278 AC121870.2-201ENSMUST00000214343 1870 ntBASIC9.68□□□□□ -0.86
Rab5cP35278 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Rab5cP35278 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC9.68□□□□□ -0.86
Rab5cP35278 CT868720.1-201ENSMUST00000223069 2544 ntBASIC9.67□□□□□ -0.86
Rab5cP35278 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Rab5cP35278 Gm19327-201ENSMUST00000220651 3271 ntBASIC9.67□□□□□ -0.86
Rab5cP35278 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Rab5cP35278 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC9.67□□□□□ -0.86
Rab5cP35278 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC9.67□□□□□ -0.86
Rab5cP35278 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Rab5cP35278 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
Rab5cP35278 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Mir449b-201ENSMUST00000104833 80 ntBASIC9.67□□□□□ -0.86
Rab5cP35278 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC9.67□□□□□ -0.86
Rab5cP35278 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC9.67□□□□□ -0.86
Rab5cP35278 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Rab5cP35278 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Rab5cP35278 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Rab5cP35278 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
Rab5cP35278 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC9.67□□□□□ -0.86
Rab5cP35278 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.67□□□□□ -0.86
Rab5cP35278 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC9.67□□□□□ -0.86
Rab5cP35278 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rab5cP35278 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rab5cP35278 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rab5cP35278 Gm43447-201ENSMUST00000198471 1535 ntBASIC9.66□□□□□ -0.86
Rab5cP35278 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Rab5cP35278 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rab5cP35278 Gm45191-201ENSMUST00000205846 5439 ntBASIC9.66□□□□□ -0.86
Rab5cP35278 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rab5cP35278 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rab5cP35278 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rab5cP35278 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Rab5cP35278 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rab5cP35278 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rab5cP35278 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rab5cP35278 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rab5cP35278 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rab5cP35278 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rab5cP35278 Gm14494-201ENSMUST00000118786 435 ntBASIC9.66□□□□□ -0.86
Rab5cP35278 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rab5cP35278 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC9.66□□□□□ -0.86
Rab5cP35278 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rab5cP35278 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC9.66□□□□□ -0.86
Rab5cP35278 Gm21362-201ENSMUST00000194272 928 ntBASIC9.66□□□□□ -0.86
Rab5cP35278 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC9.66□□□□□ -0.86
Rab5cP35278 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC9.66□□□□□ -0.86
Rab5cP35278 Ndufaf2-202ENSMUST00000223734 556 ntBASIC9.66□□□□□ -0.86
Rab5cP35278 Cdk7-205ENSMUST00000225990 1159 ntBASIC9.66□□□□□ -0.86
Rab5cP35278 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rab5cP35278 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rab5cP35278 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rab5cP35278 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rab5cP35278 Gm24526-201ENSMUST00000082921 158 ntBASIC9.66□□□□□ -0.86
Rab5cP35278 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rab5cP35278 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rab5cP35278 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rab5cP35278 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rab5cP35278 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC9.66□□□□□ -0.86
Rab5cP35278 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC9.66□□□□□ -0.86
Rab5cP35278 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rab5cP35278 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms