Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.19□□□□□ -0.46
Mmp13P33435 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.19□□□□□ -0.46
Mmp13P33435 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.19□□□□□ -0.46
Mmp13P33435 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp13P33435 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp13P33435 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp13P33435 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp13P33435 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp13P33435 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.19□□□□□ -0.46
Mmp13P33435 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp13P33435 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp13P33435 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.19□□□□□ -0.46
Mmp13P33435 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp13P33435 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.19□□□□□ -0.46
Mmp13P33435 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp13P33435 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.19□□□□□ -0.46
Mmp13P33435 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp13P33435 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Mmp13P33435 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.19□□□□□ -0.46
Mmp13P33435 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp13P33435 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mmp13P33435 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mmp13P33435 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Mmp13P33435 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Mmp13P33435 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mmp13P33435 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.18□□□□□ -0.46
Mmp13P33435 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mmp13P33435 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mmp13P33435 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mmp13P33435 Gm24934-201ENSMUST00000103764 111 ntBASIC12.18□□□□□ -0.46
Mmp13P33435 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.18□□□□□ -0.46
Mmp13P33435 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.18□□□□□ -0.46
Mmp13P33435 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mmp13P33435 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Mmp13P33435 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.18□□□□□ -0.46
Mmp13P33435 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Mmp13P33435 Gm13570-201ENSMUST00000140763 309 ntBASIC12.18□□□□□ -0.46
Mmp13P33435 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mmp13P33435 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Mmp13P33435 Gm27046-201ENSMUST00000182160 463 ntBASIC12.18□□□□□ -0.46
Mmp13P33435 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.18□□□□□ -0.46
Mmp13P33435 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.18□□□□□ -0.46
Mmp13P33435 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.18□□□□□ -0.46
Mmp13P33435 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mmp13P33435 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mmp13P33435 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mmp13P33435 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.18□□□□□ -0.46
Mmp13P33435 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Mmp13P33435 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Mmp13P33435 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mmp13P33435 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mmp13P33435 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mmp13P33435 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Mmp13P33435 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mmp13P33435 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Mmp13P33435 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Mmp13P33435 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.18□□□□□ -0.46
Mmp13P33435 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mmp13P33435 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Mmp13P33435 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.18□□□□□ -0.46
Mmp13P33435 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mmp13P33435 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mmp13P33435 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Mmp13P33435 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Mmp13P33435 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Mmp13P33435 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Mmp13P33435 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Mmp13P33435 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Mmp13P33435 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Mmp13P33435 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Mmp13P33435 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Mmp13P33435 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Mmp13P33435 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Mmp13P33435 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Mmp13P33435 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Mmp13P33435 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.17□□□□□ -0.46
Mmp13P33435 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Mmp13P33435 Mir877-201ENSMUST00000104738 85 ntBASIC12.17□□□□□ -0.46
Mmp13P33435 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Mmp13P33435 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Mmp13P33435 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Mmp13P33435 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.17□□□□□ -0.46
Mmp13P33435 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Mmp13P33435 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.17□□□□□ -0.46
Mmp13P33435 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.17□□□□□ -0.46
Mmp13P33435 Gm3096-201ENSMUST00000185770 364 ntBASIC12.17□□□□□ -0.46
Mmp13P33435 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.17□□□□□ -0.46
Mmp13P33435 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Mmp13P33435 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Mmp13P33435 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Mmp13P33435 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.17□□□□□ -0.46
Mmp13P33435 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Mmp13P33435 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.17□□□□□ -0.46
Mmp13P33435 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Mmp13P33435 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.17□□□□□ -0.46
Mmp13P33435 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.17□□□□□ -0.46
Mmp13P33435 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Mmp13P33435 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Mmp13P33435 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.17□□□□□ -0.46
Mmp13P33435 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms