Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rom1P32958 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rom1P32958 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Rom1P32958 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Rom1P32958 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Rom1P32958 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Rom1P32958 Btrc-209ENSMUST00000224478 2194 ntBASIC9.4□□□□□ -0.91
Rom1P32958 Gm14005-209ENSMUST00000224993 1832 ntBASIC9.4□□□□□ -0.91
Rom1P32958 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Rom1P32958 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Rom1P32958 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Rom1P32958 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.4□□□□□ -0.91
Rom1P32958 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Rom1P32958 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC9.4□□□□□ -0.91
Rom1P32958 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Rom1P32958 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Rom1P32958 Gm29245-201ENSMUST00000187332 1416 ntBASIC9.39□□□□□ -0.91
Rom1P32958 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Rom1P32958 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
Rom1P32958 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Rom1P32958 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
Rom1P32958 Gm9796-201ENSMUST00000062249 2250 ntBASIC9.39□□□□□ -0.91
Rom1P32958 Gm43931-201ENSMUST00000204817 2870 ntBASIC9.39□□□□□ -0.91
Rom1P32958 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Rom1P32958 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC9.39□□□□□ -0.91
Rom1P32958 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Mir692-1-201ENSMUST00000102263 109 ntBASIC9.39□□□□□ -0.91
Rom1P32958 Gm14247-201ENSMUST00000120950 237 ntBASIC9.39□□□□□ -0.91
Rom1P32958 Gm13342-201ENSMUST00000121055 207 ntBASIC9.39□□□□□ -0.91
Rom1P32958 Gm14441-201ENSMUST00000121960 540 ntBASIC9.39□□□□□ -0.91
Rom1P32958 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC9.39□□□□□ -0.91
Rom1P32958 Gm20949-201ENSMUST00000206478 952 ntBASIC9.39□□□□□ -0.91
Rom1P32958 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Rom1P32958 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC9.39□□□□□ -0.91
Rom1P32958 AC154404.1-201ENSMUST00000223601 2077 ntBASIC9.39□□□□□ -0.91
Rom1P32958 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Rom1P32958 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Rom1P32958 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Rom1P32958 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Rom1P32958 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rom1P32958 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC9.38□□□□□ -0.91
Rom1P32958 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Rom1P32958 Gm44415-201ENSMUST00000204151 2112 ntBASIC9.38□□□□□ -0.91
Rom1P32958 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 AC154314.2-201ENSMUST00000223677 3502 ntBASIC9.38□□□□□ -0.91
Rom1P32958 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC9.38□□□□□ -0.91
Rom1P32958 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
Rom1P32958 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms