Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc11P31313 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Hoxc11P31313 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Hoxc11P31313 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc11P31313 Gm15515-201ENSMUST00000117827 822 ntBASIC11.58□□□□□ -0.56
Hoxc11P31313 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.58□□□□□ -0.56
Hoxc11P31313 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.58□□□□□ -0.56
Hoxc11P31313 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Hoxc11P31313 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc11P31313 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.58□□□□□ -0.56
Hoxc11P31313 Gm5523-201ENSMUST00000180415 997 ntBASIC11.58□□□□□ -0.56
Hoxc11P31313 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc11P31313 Gm43184-201ENSMUST00000197247 542 ntBASIC11.58□□□□□ -0.56
Hoxc11P31313 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc11P31313 Gm5369-201ENSMUST00000217499 588 ntBASIC11.58□□□□□ -0.56
Hoxc11P31313 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc11P31313 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc11P31313 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc11P31313 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc11P31313 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc11P31313 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.58□□□□□ -0.56
Hoxc11P31313 Gm21811-201ENSMUST00000096485 930 ntBASIC11.58□□□□□ -0.56
Hoxc11P31313 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc11P31313 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc11P31313 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc11P31313 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc11P31313 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc11P31313 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc11P31313 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc11P31313 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc11P31313 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc11P31313 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.58□□□□□ -0.56
Hoxc11P31313 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc11P31313 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.58□□□□□ -0.56
Hoxc11P31313 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Hoxc11P31313 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.57□□□□□ -0.56
Hoxc11P31313 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.57□□□□□ -0.56
Hoxc11P31313 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Hoxc11P31313 Gm14058-201ENSMUST00000116082 735 ntBASIC11.57□□□□□ -0.56
Hoxc11P31313 Gm12616-201ENSMUST00000118594 382 ntBASIC11.57□□□□□ -0.56
Hoxc11P31313 Gm12501-201ENSMUST00000119163 529 ntBASIC11.57□□□□□ -0.56
Hoxc11P31313 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.57□□□□□ -0.56
Hoxc11P31313 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Hoxc11P31313 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.57□□□□□ -0.56
Hoxc11P31313 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.57□□□□□ -0.56
Hoxc11P31313 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Gm12624-201ENSMUST00000177615 382 ntBASIC11.57□□□□□ -0.56
Hoxc11P31313 Gm12621-201ENSMUST00000177760 382 ntBASIC11.57□□□□□ -0.56
Hoxc11P31313 Gm12615-201ENSMUST00000177970 382 ntBASIC11.57□□□□□ -0.56
Hoxc11P31313 Gm12622-201ENSMUST00000177975 382 ntBASIC11.57□□□□□ -0.56
Hoxc11P31313 Gm12627-201ENSMUST00000178412 382 ntBASIC11.57□□□□□ -0.56
Hoxc11P31313 Gm12625-201ENSMUST00000179122 382 ntBASIC11.57□□□□□ -0.56
Hoxc11P31313 Gm12614-201ENSMUST00000179586 382 ntBASIC11.57□□□□□ -0.56
Hoxc11P31313 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.57□□□□□ -0.56
Hoxc11P31313 Gm12613-201ENSMUST00000180323 382 ntBASIC11.57□□□□□ -0.56
Hoxc11P31313 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.57□□□□□ -0.56
Hoxc11P31313 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.57□□□□□ -0.56
Hoxc11P31313 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Hoxc11P31313 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.57□□□□□ -0.56
Hoxc11P31313 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Hoxc11P31313 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.57□□□□□ -0.56
Hoxc11P31313 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.57□□□□□ -0.56
Hoxc11P31313 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.57□□□□□ -0.56
Hoxc11P31313 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.57□□□□□ -0.56
Hoxc11P31313 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.57□□□□□ -0.56
Hoxc11P31313 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc11P31313 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms