Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Mmp3P28862 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp3P28862 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp3P28862 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp3P28862 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.72□□□□□ -0.37
Mmp3P28862 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp3P28862 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Mmp3P28862 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp3P28862 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp3P28862 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Mmp3P28862 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Mmp3P28862 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp3P28862 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp3P28862 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp3P28862 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp3P28862 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp3P28862 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Mmp3P28862 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp3P28862 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp3P28862 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp3P28862 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp3P28862 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp3P28862 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp3P28862 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Mmp3P28862 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.71□□□□□ -0.37
Mmp3P28862 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp3P28862 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.71□□□□□ -0.37
Mmp3P28862 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp3P28862 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.71□□□□□ -0.37
Mmp3P28862 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Mmp3P28862 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.71□□□□□ -0.37
Mmp3P28862 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp3P28862 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp3P28862 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.71□□□□□ -0.37
Mmp3P28862 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp3P28862 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Mmp3P28862 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp3P28862 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.71□□□□□ -0.37
Mmp3P28862 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Mmp3P28862 Mir7076-201ENSMUST00000183519 74 ntBASIC12.71□□□□□ -0.37
Mmp3P28862 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.71□□□□□ -0.37
Mmp3P28862 Gm43520-201ENSMUST00000197996 164 ntBASIC12.71□□□□□ -0.37
Mmp3P28862 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.71□□□□□ -0.37
Mmp3P28862 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.71□□□□□ -0.37
Mmp3P28862 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp3P28862 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp3P28862 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Mmp3P28862 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp3P28862 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp3P28862 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp3P28862 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Mmp3P28862 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Mmp3P28862 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Mmp3P28862 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.71□□□□□ -0.38
Mmp3P28862 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Mmp3P28862 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Mmp3P28862 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Mmp3P28862 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Mmp3P28862 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Mmp3P28862 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Mmp3P28862 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Mmp3P28862 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.7□□□□□ -0.38
Mmp3P28862 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp3P28862 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
Mmp3P28862 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp3P28862 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp3P28862 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp3P28862 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp3P28862 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp3P28862 Gm25076-201ENSMUST00000104098 132 ntBASIC12.7□□□□□ -0.38
Mmp3P28862 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp3P28862 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp3P28862 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.7□□□□□ -0.38
Mmp3P28862 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Mmp3P28862 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.7□□□□□ -0.38
Mmp3P28862 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp3P28862 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp3P28862 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp3P28862 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp3P28862 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp3P28862 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp3P28862 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp3P28862 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp3P28862 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp3P28862 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp3P28862 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp3P28862 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp3P28862 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp3P28862 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp3P28862 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp3P28862 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp3P28862 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp3P28862 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.69□□□□□ -0.38
Mmp3P28862 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp3P28862 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp3P28862 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp3P28862 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.69□□□□□ -0.38
Mmp3P28862 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp3P28862 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp3P28862 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms