Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.06□□□□□ -0.64
Cd40lgP27548 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cd40lgP27548 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Cd40lgP27548 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cd40lgP27548 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cd40lgP27548 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cd40lgP27548 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cd40lgP27548 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cd40lgP27548 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cd40lgP27548 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Cd40lgP27548 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cd40lgP27548 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cd40lgP27548 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cd40lgP27548 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cd40lgP27548 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.05□□□□□ -0.64
Cd40lgP27548 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.05□□□□□ -0.64
Cd40lgP27548 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cd40lgP27548 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cd40lgP27548 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.05□□□□□ -0.64
Cd40lgP27548 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.05□□□□□ -0.64
Cd40lgP27548 Gm18212-201ENSMUST00000211678 889 ntBASIC11.05□□□□□ -0.64
Cd40lgP27548 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.05□□□□□ -0.64
Cd40lgP27548 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.05□□□□□ -0.64
Cd40lgP27548 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.05□□□□□ -0.64
Cd40lgP27548 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Cd40lgP27548 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.05□□□□□ -0.64
Cd40lgP27548 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cd40lgP27548 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cd40lgP27548 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Cd40lgP27548 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cd40lgP27548 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cd40lgP27548 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.05□□□□□ -0.64
Cd40lgP27548 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.05□□□□□ -0.64
Cd40lgP27548 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.05□□□□□ -0.64
Cd40lgP27548 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cd40lgP27548 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.05□□□□□ -0.64
Cd40lgP27548 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cd40lgP27548 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC11.05□□□□□ -0.64
Cd40lgP27548 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cd40lgP27548 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cd40lgP27548 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Cd40lgP27548 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cd40lgP27548 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.05□□□□□ -0.64
Cd40lgP27548 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cd40lgP27548 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cd40lgP27548 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.04□□□□□ -0.64
Cd40lgP27548 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cd40lgP27548 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.04□□□□□ -0.64
Cd40lgP27548 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.04□□□□□ -0.64
Cd40lgP27548 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.04□□□□□ -0.64
Cd40lgP27548 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 Gm23912-201ENSMUST00000104687 87 ntBASIC11.04□□□□□ -0.64
Cd40lgP27548 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.04□□□□□ -0.64
Cd40lgP27548 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cd40lgP27548 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 Gm32999-201ENSMUST00000192693 562 ntBASIC11.04□□□□□ -0.64
Cd40lgP27548 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.04□□□□□ -0.64
Cd40lgP27548 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.04□□□□□ -0.64
Cd40lgP27548 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.04□□□□□ -0.64
Cd40lgP27548 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.04□□□□□ -0.64
Cd40lgP27548 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd40lgP27548 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd40lgP27548 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd40lgP27548 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd40lgP27548 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd40lgP27548 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.03□□□□□ -0.64
Cd40lgP27548 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.03□□□□□ -0.64
Cd40lgP27548 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd40lgP27548 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cd40lgP27548 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cd40lgP27548 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cd40lgP27548 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms