Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nfkb1P25799 Cog3-203ENSMUST00000227473 4197 ntBASIC12.26□□□□□ -0.45
Nfkb1P25799 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nfkb1P25799 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nfkb1P25799 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Nfkb1P25799 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.26□□□□□ -0.45
Nfkb1P25799 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Nfkb1P25799 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.26□□□□□ -0.45
Nfkb1P25799 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nfkb1P25799 Gm7467-201ENSMUST00000185173 652 ntBASIC12.26□□□□□ -0.45
Nfkb1P25799 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Nfkb1P25799 Gm10774-201ENSMUST00000188689 204 ntBASIC12.26□□□□□ -0.45
Nfkb1P25799 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.26□□□□□ -0.45
Nfkb1P25799 Mir7686-201ENSMUST00000200604 57 ntBASIC12.26□□□□□ -0.45
Nfkb1P25799 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.26□□□□□ -0.45
Nfkb1P25799 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.26□□□□□ -0.45
Nfkb1P25799 Gm45575-201ENSMUST00000210283 548 ntBASIC12.26□□□□□ -0.45
Nfkb1P25799 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC12.26□□□□□ -0.45
Nfkb1P25799 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.26□□□□□ -0.45
Nfkb1P25799 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Nfkb1P25799 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nfkb1P25799 Gm25007-201ENSMUST00000083808 133 ntBASIC12.26□□□□□ -0.45
Nfkb1P25799 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nfkb1P25799 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.26□□□□□ -0.45
Nfkb1P25799 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nfkb1P25799 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nfkb1P25799 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nfkb1P25799 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nfkb1P25799 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nfkb1P25799 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Nfkb1P25799 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nfkb1P25799 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nfkb1P25799 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nfkb1P25799 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nfkb1P25799 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nfkb1P25799 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nfkb1P25799 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Nfkb1P25799 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nfkb1P25799 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nfkb1P25799 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Nfkb1P25799 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nfkb1P25799 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nfkb1P25799 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.25□□□□□ -0.45
Nfkb1P25799 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nfkb1P25799 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nfkb1P25799 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nfkb1P25799 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nfkb1P25799 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nfkb1P25799 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nfkb1P25799 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nfkb1P25799 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nfkb1P25799 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nfkb1P25799 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nfkb1P25799 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.25□□□□□ -0.45
Nfkb1P25799 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.25□□□□□ -0.45
Nfkb1P25799 Gm19459-201ENSMUST00000176240 835 ntBASIC12.25□□□□□ -0.45
Nfkb1P25799 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Nfkb1P25799 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nfkb1P25799 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.25□□□□□ -0.45
Nfkb1P25799 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.25□□□□□ -0.45
Nfkb1P25799 Gm5051-201ENSMUST00000204085 485 ntBASIC12.25□□□□□ -0.45
Nfkb1P25799 Gm44126-201ENSMUST00000204831 514 ntBASIC12.25□□□□□ -0.45
Nfkb1P25799 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nfkb1P25799 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.25□□□□□ -0.45
Nfkb1P25799 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nfkb1P25799 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nfkb1P25799 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nfkb1P25799 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Nfkb1P25799 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nfkb1P25799 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Nfkb1P25799 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nfkb1P25799 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nfkb1P25799 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.25□□□□□ -0.45
Nfkb1P25799 Matn2-203ENSMUST00000226766 3252 ntBASIC12.25□□□□□ -0.45
Nfkb1P25799 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nfkb1P25799 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nfkb1P25799 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nfkb1P25799 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nfkb1P25799 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Nfkb1P25799 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nfkb1P25799 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nfkb1P25799 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nfkb1P25799 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nfkb1P25799 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nfkb1P25799 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nfkb1P25799 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Nfkb1P25799 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nfkb1P25799 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Nfkb1P25799 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nfkb1P25799 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nfkb1P25799 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nfkb1P25799 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nfkb1P25799 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nfkb1P25799 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nfkb1P25799 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nfkb1P25799 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.24□□□□□ -0.45
Nfkb1P25799 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nfkb1P25799 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nfkb1P25799 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Nfkb1P25799 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 115.6 ms