Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Gm21998-201ENSMUST00000117552 1308 ntBASIC9.93□□□□□ -0.82
Col8a2P25318 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Gm15610-201ENSMUST00000120584 195 ntBASIC9.93□□□□□ -0.82
Col8a2P25318 Gm15595-201ENSMUST00000120840 961 ntBASIC9.93□□□□□ -0.82
Col8a2P25318 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC9.93□□□□□ -0.82
Col8a2P25318 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC9.93□□□□□ -0.82
Col8a2P25318 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC9.93□□□□□ -0.82
Col8a2P25318 Gm6397-201ENSMUST00000161973 1069 ntBASIC9.93□□□□□ -0.82
Col8a2P25318 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC9.93□□□□□ -0.82
Col8a2P25318 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Col8a2P25318 Gm8343-201ENSMUST00000182705 994 ntBASIC9.93□□□□□ -0.82
Col8a2P25318 Gm34767-201ENSMUST00000191813 1062 ntBASIC9.93□□□□□ -0.82
Col8a2P25318 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC9.93□□□□□ -0.82
Col8a2P25318 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Col8a2P25318 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.93□□□□□ -0.82
Col8a2P25318 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 AC151275.1-201ENSMUST00000224870 585 ntBASIC9.93□□□□□ -0.82
Col8a2P25318 AC131330.1-201ENSMUST00000227814 1015 ntBASIC9.93□□□□□ -0.82
Col8a2P25318 Ntng1-201ENSMUST00000051253 327 ntBASIC9.93□□□□□ -0.82
Col8a2P25318 Gm7551-201ENSMUST00000089593 1074 ntBASIC9.93□□□□□ -0.82
Col8a2P25318 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 AC093022.4-203ENSMUST00000228523 2657 ntBASIC9.93□□□□□ -0.82
Col8a2P25318 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.93□□□□□ -0.82
Col8a2P25318 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Gm42480-201ENSMUST00000198434 2595 ntBASIC9.93□□□□□ -0.82
Col8a2P25318 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Col8a2P25318 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC9.93□□□□□ -0.82
Col8a2P25318 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Col8a2P25318 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a2P25318 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a2P25318 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a2P25318 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a2P25318 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Col8a2P25318 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Col8a2P25318 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Col8a2P25318 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.92□□□□□ -0.82
Col8a2P25318 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a2P25318 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Col8a2P25318 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a2P25318 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a2P25318 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a2P25318 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a2P25318 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC9.92□□□□□ -0.82
Col8a2P25318 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Col8a2P25318 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC9.92□□□□□ -0.82
Col8a2P25318 Gm12579-201ENSMUST00000118040 783 ntBASIC9.92□□□□□ -0.82
Col8a2P25318 Gm8566-201ENSMUST00000120174 465 ntBASIC9.92□□□□□ -0.82
Col8a2P25318 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a2P25318 Gm22334-201ENSMUST00000158070 133 ntBASIC9.92□□□□□ -0.82
Col8a2P25318 Gm22902-201ENSMUST00000158488 302 ntBASIC9.92□□□□□ -0.82
Col8a2P25318 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC9.92□□□□□ -0.82
Col8a2P25318 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC9.92□□□□□ -0.82
Col8a2P25318 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Col8a2P25318 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a2P25318 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC9.92□□□□□ -0.82
Col8a2P25318 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC9.92□□□□□ -0.82
Col8a2P25318 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC9.92□□□□□ -0.82
Col8a2P25318 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a2P25318 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC9.92□□□□□ -0.82
Col8a2P25318 Gm8959-201ENSMUST00000213150 571 ntBASIC9.92□□□□□ -0.82
Col8a2P25318 AC159819.2-201ENSMUST00000216151 342 ntBASIC9.92□□□□□ -0.82
Col8a2P25318 AC113082.1-201ENSMUST00000217324 327 ntBASIC9.92□□□□□ -0.82
Col8a2P25318 Gm14267-206ENSMUST00000226870 1209 ntBASIC9.92□□□□□ -0.82
Col8a2P25318 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Col8a2P25318 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a2P25318 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Col8a2P25318 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a2P25318 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a2P25318 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a2P25318 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a2P25318 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a2P25318 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a2P25318 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a2P25318 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a2P25318 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms