Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm27682-201ENSMUST00000183930 110 ntBASIC9.66□□□□□ -0.86
Cdx1P18111 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx1P18111 Gm38266-201ENSMUST00000194931 421 ntBASIC9.66□□□□□ -0.86
Cdx1P18111 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC9.66□□□□□ -0.86
Cdx1P18111 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx1P18111 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx1P18111 CT573086.1-201ENSMUST00000227202 1074 ntBASIC9.66□□□□□ -0.86
Cdx1P18111 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx1P18111 Gm17383-201ENSMUST00000078739 1041 ntBASIC9.66□□□□□ -0.86
Cdx1P18111 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Cdx1P18111 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx1P18111 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC9.66□□□□□ -0.86
Cdx1P18111 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx1P18111 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Cdx1P18111 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx1P18111 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx1P18111 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC9.66□□□□□ -0.86
Cdx1P18111 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC9.66□□□□□ -0.86
Cdx1P18111 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx1P18111 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx1P18111 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx1P18111 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Cdx1P18111 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx1P18111 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC9.66□□□□□ -0.86
Cdx1P18111 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx1P18111 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC9.66□□□□□ -0.86
Cdx1P18111 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx1P18111 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC9.66□□□□□ -0.86
Cdx1P18111 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx1P18111 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC9.66□□□□□ -0.86
Cdx1P18111 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx1P18111 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx1P18111 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Cdx1P18111 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx1P18111 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx1P18111 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx1P18111 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx1P18111 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx1P18111 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC9.65□□□□□ -0.86
Cdx1P18111 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx1P18111 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC9.65□□□□□ -0.86
Cdx1P18111 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Cdx1P18111 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Cdx1P18111 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx1P18111 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Cdx1P18111 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC9.65□□□□□ -0.86
Cdx1P18111 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx1P18111 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC9.65□□□□□ -0.86
Cdx1P18111 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx1P18111 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC9.65□□□□□ -0.86
Cdx1P18111 Gm38002-201ENSMUST00000193255 180 ntBASIC9.65□□□□□ -0.86
Cdx1P18111 Gm37922-201ENSMUST00000195596 455 ntBASIC9.65□□□□□ -0.86
Cdx1P18111 Gm37497-201ENSMUST00000195830 798 ntBASIC9.65□□□□□ -0.86
Cdx1P18111 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC9.65□□□□□ -0.86
Cdx1P18111 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx1P18111 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC9.65□□□□□ -0.86
Cdx1P18111 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC9.65□□□□□ -0.86
Cdx1P18111 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx1P18111 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC9.65□□□□□ -0.86
Cdx1P18111 AC133598.1-201ENSMUST00000224327 660 ntBASIC9.65□□□□□ -0.86
Cdx1P18111 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
Cdx1P18111 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Cdx1P18111 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.65□□□□□ -0.86
Cdx1P18111 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx1P18111 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC9.65□□□□□ -0.86
Cdx1P18111 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx1P18111 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx1P18111 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx1P18111 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Cdx1P18111 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Cdx1P18111 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx1P18111 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx1P18111 Gm15544-201ENSMUST00000118776 1531 ntBASIC9.65□□□□□ -0.86
Cdx1P18111 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Cdx1P18111 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Cdx1P18111 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx1P18111 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cdx1P18111 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Cdx1P18111 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC9.65□□□□□ -0.87
Cdx1P18111 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cdx1P18111 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Cdx1P18111 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Cdx1P18111 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cdx1P18111 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cdx1P18111 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.87
Cdx1P18111 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cdx1P18111 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cdx1P18111 AC125374.1-201ENSMUST00000213573 1400 ntBASIC9.65□□□□□ -0.87
Cdx1P18111 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Cdx1P18111 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx1P18111 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx1P18111 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Cdx1P18111 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx1P18111 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx1P18111 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Cdx1P18111 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx1P18111 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx1P18111 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx1P18111 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
Cdx1P18111 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms