Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Fv4P11370 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Fv4P11370 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Fv4P11370 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Fv4P11370 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.49□□□□□ -0.57
Fv4P11370 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Fv4P11370 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Fv4P11370 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Fv4P11370 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Fv4P11370 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Fv4P11370 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Fv4P11370 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Fv4P11370 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Fv4P11370 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Fv4P11370 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Fv4P11370 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.48□□□□□ -0.57
Fv4P11370 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.48□□□□□ -0.57
Fv4P11370 Gm11930-201ENSMUST00000117788 190 ntBASIC11.48□□□□□ -0.57
Fv4P11370 Gm12241-201ENSMUST00000118330 726 ntBASIC11.48□□□□□ -0.57
Fv4P11370 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 Gm6963-201ENSMUST00000147879 379 ntBASIC11.48□□□□□ -0.57
Fv4P11370 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Fv4P11370 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Fv4P11370 Gm5070-201ENSMUST00000177599 862 ntBASIC11.48□□□□□ -0.57
Fv4P11370 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Fv4P11370 Gm27501-201ENSMUST00000183599 107 ntBASIC11.48□□□□□ -0.57
Fv4P11370 Gm6621-201ENSMUST00000193251 772 ntBASIC11.48□□□□□ -0.57
Fv4P11370 Gm43002-201ENSMUST00000200310 155 ntBASIC11.48□□□□□ -0.57
Fv4P11370 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Fv4P11370 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Fv4P11370 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.48□□□□□ -0.57
Fv4P11370 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fv4P11370 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.47□□□□□ -0.57
Fv4P11370 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Fv4P11370 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.47□□□□□ -0.57
Fv4P11370 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Fv4P11370 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Fv4P11370 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.47□□□□□ -0.57
Fv4P11370 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Fv4P11370 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.47□□□□□ -0.57
Fv4P11370 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fv4P11370 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.47□□□□□ -0.57
Fv4P11370 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.47□□□□□ -0.57
Fv4P11370 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Fv4P11370 Gm11511-201ENSMUST00000118146 540 ntBASIC11.47□□□□□ -0.57
Fv4P11370 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Fv4P11370 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.47□□□□□ -0.57
Fv4P11370 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.47□□□□□ -0.57
Fv4P11370 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Fv4P11370 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Fv4P11370 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Fv4P11370 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.47□□□□□ -0.57
Fv4P11370 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Fv4P11370 Gm38314-201ENSMUST00000195709 625 ntBASIC11.47□□□□□ -0.57
Fv4P11370 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.47□□□□□ -0.57
Fv4P11370 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 155.5 ms