Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC10.49□□□□□ -0.73
Ccl3P10855 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Ccl3P10855 Gm15615-201ENSMUST00000118876 198 ntBASIC10.49□□□□□ -0.73
Ccl3P10855 Gm11244-201ENSMUST00000121243 237 ntBASIC10.49□□□□□ -0.73
Ccl3P10855 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC10.49□□□□□ -0.73
Ccl3P10855 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl3P10855 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Ccl3P10855 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.49□□□□□ -0.73
Ccl3P10855 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Ccl3P10855 Gm3017-201ENSMUST00000203603 1126 ntBASIC10.49□□□□□ -0.73
Ccl3P10855 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC10.49□□□□□ -0.73
Ccl3P10855 CT009546.1-201ENSMUST00000222573 1120 ntBASIC10.49□□□□□ -0.73
Ccl3P10855 AC154176.1-201ENSMUST00000225897 220 ntBASIC10.49□□□□□ -0.73
Ccl3P10855 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
Ccl3P10855 Gm23105-201ENSMUST00000083719 134 ntBASIC10.49□□□□□ -0.73
Ccl3P10855 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl3P10855 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl3P10855 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl3P10855 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl3P10855 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl3P10855 Gm6655-201ENSMUST00000201932 1309 ntBASIC10.49□□□□□ -0.73
Ccl3P10855 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl3P10855 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl3P10855 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.49□□□□□ -0.73
Ccl3P10855 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl3P10855 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC10.49□□□□□ -0.73
Ccl3P10855 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl3P10855 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Ccl3P10855 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Ccl3P10855 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl3P10855 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC10.49□□□□□ -0.73
Ccl3P10855 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl3P10855 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Ccl3P10855 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl3P10855 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl3P10855 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl3P10855 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl3P10855 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl3P10855 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl3P10855 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl3P10855 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Ccl3P10855 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl3P10855 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl3P10855 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl3P10855 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl3P10855 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Ccl3P10855 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.48□□□□□ -0.73
Ccl3P10855 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl3P10855 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl3P10855 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl3P10855 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC10.48□□□□□ -0.73
Ccl3P10855 Gm13600-201ENSMUST00000117949 744 ntBASIC10.48□□□□□ -0.73
Ccl3P10855 Gm12990-201ENSMUST00000120372 468 ntBASIC10.48□□□□□ -0.73
Ccl3P10855 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl3P10855 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.48□□□□□ -0.73
Ccl3P10855 Gm26134-201ENSMUST00000178484 110 ntBASIC10.48□□□□□ -0.73
Ccl3P10855 Gm17798-201ENSMUST00000182282 1035 ntBASIC10.48□□□□□ -0.73
Ccl3P10855 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC10.48□□□□□ -0.73
Ccl3P10855 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC10.48□□□□□ -0.73
Ccl3P10855 Gm9116-201ENSMUST00000192400 1018 ntBASIC10.48□□□□□ -0.73
Ccl3P10855 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC10.48□□□□□ -0.73
Ccl3P10855 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl3P10855 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Ccl3P10855 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.48□□□□□ -0.73
Ccl3P10855 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl3P10855 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl3P10855 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.48□□□□□ -0.73
Ccl3P10855 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Ccl3P10855 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Ccl3P10855 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC10.48□□□□□ -0.73
Ccl3P10855 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl3P10855 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl3P10855 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Ccl3P10855 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.47□□□□□ -0.73
Ccl3P10855 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Ccl3P10855 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC10.47□□□□□ -0.73
Ccl3P10855 Gm10807-201ENSMUST00000177134 795 ntBASIC10.47□□□□□ -0.73
Ccl3P10855 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.47□□□□□ -0.73
Ccl3P10855 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC10.47□□□□□ -0.73
Ccl3P10855 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC10.47□□□□□ -0.73
Ccl3P10855 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.47□□□□□ -0.73
Ccl3P10855 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.47□□□□□ -0.73
Ccl3P10855 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms