Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Spata33-207ENSMUST00000212760 4074 ntBASIC8.14□□□□□ -1.11
Smim1P0C8K7 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Gm18210-201ENSMUST00000209001 1524 ntBASIC8.14□□□□□ -1.11
Smim1P0C8K7 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Gm6415-201ENSMUST00000118488 348 ntBASIC8.14□□□□□ -1.11
Smim1P0C8K7 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Mir6990-201ENSMUST00000183724 91 ntBASIC8.14□□□□□ -1.11
Smim1P0C8K7 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Gm42693-201ENSMUST00000196779 631 ntBASIC8.14□□□□□ -1.11
Smim1P0C8K7 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
Smim1P0C8K7 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
Smim1P0C8K7 AC160340.2-201ENSMUST00000220812 3675 ntBASIC8.14□□□□□ -1.11
Smim1P0C8K7 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smim1P0C8K7 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Smim1P0C8K7 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
Smim1P0C8K7 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC8.13□□□□□ -1.11
Smim1P0C8K7 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Smim1P0C8K7 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Smim1P0C8K7 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Smim1P0C8K7 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Smim1P0C8K7 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Smim1P0C8K7 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC8.13□□□□□ -1.11
Smim1P0C8K7 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Smim1P0C8K7 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Smim1P0C8K7 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Smim1P0C8K7 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC8.13□□□□□ -1.11
Smim1P0C8K7 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Smim1P0C8K7 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Smim1P0C8K7 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC8.13□□□□□ -1.11
Smim1P0C8K7 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Smim1P0C8K7 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Smim1P0C8K7 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Smim1P0C8K7 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Smim1P0C8K7 Gm11700-201ENSMUST00000119409 403 ntBASIC8.13□□□□□ -1.11
Smim1P0C8K7 Gm12416-201ENSMUST00000120911 1008 ntBASIC8.13□□□□□ -1.11
Smim1P0C8K7 Gm13365-201ENSMUST00000121188 973 ntBASIC8.13□□□□□ -1.11
Smim1P0C8K7 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Smim1P0C8K7 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC8.13□□□□□ -1.11
Smim1P0C8K7 Cd63-ps-201ENSMUST00000145417 875 ntBASIC8.13□□□□□ -1.11
Smim1P0C8K7 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Smim1P0C8K7 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC8.13□□□□□ -1.11
Smim1P0C8K7 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC8.13□□□□□ -1.11
Smim1P0C8K7 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC8.13□□□□□ -1.11
Smim1P0C8K7 Gm24158-201ENSMUST00000175263 71 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms