Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hoxc9P09633 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Hoxc9P09633 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hoxc9P09633 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Hoxc9P09633 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hoxc9P09633 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hoxc9P09633 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hoxc9P09633 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hoxc9P09633 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Hoxc9P09633 Gm15549-201ENSMUST00000121595 622 ntBASIC15.33■□□□□ 0.04
Hoxc9P09633 Gm10169-201ENSMUST00000121822 348 ntBASIC15.33■□□□□ 0.04
Hoxc9P09633 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC15.33■□□□□ 0.04
Hoxc9P09633 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC15.33■□□□□ 0.04
Hoxc9P09633 Gm20495-201ENSMUST00000173902 235 ntBASIC15.33■□□□□ 0.04
Hoxc9P09633 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC15.33■□□□□ 0.04
Hoxc9P09633 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hoxc9P09633 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC15.33■□□□□ 0.04
Hoxc9P09633 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC15.33■□□□□ 0.04
Hoxc9P09633 Gm18059-201ENSMUST00000208073 580 ntBASIC15.33■□□□□ 0.04
Hoxc9P09633 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC15.33■□□□□ 0.04
Hoxc9P09633 Gm45758-201ENSMUST00000212448 1006 ntBASIC15.33■□□□□ 0.04
Hoxc9P09633 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Hoxc9P09633 CT030653.1-201ENSMUST00000224382 1279 ntBASIC15.33■□□□□ 0.04
Hoxc9P09633 Gm8899-201ENSMUST00000214635 1332 ntBASIC15.33■□□□□ 0.04
Hoxc9P09633 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hoxc9P09633 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hoxc9P09633 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hoxc9P09633 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC15.33■□□□□ 0.04
Hoxc9P09633 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hoxc9P09633 Gm17435-202ENSMUST00000212699 1998 ntBASIC15.33■□□□□ 0.04
Hoxc9P09633 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hoxc9P09633 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hoxc9P09633 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hoxc9P09633 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc9P09633 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Hoxc9P09633 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc9P09633 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC15.32■□□□□ 0.04
Hoxc9P09633 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc9P09633 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc9P09633 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Hoxc9P09633 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC15.32■□□□□ 0.04
Hoxc9P09633 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Hoxc9P09633 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC15.32■□□□□ 0.04
Hoxc9P09633 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC15.32■□□□□ 0.04
Hoxc9P09633 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC15.32■□□□□ 0.04
Hoxc9P09633 Gm25492-201ENSMUST00000157383 129 ntBASIC15.32■□□□□ 0.04
Hoxc9P09633 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
Hoxc9P09633 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC15.32■□□□□ 0.04
Hoxc9P09633 Gm25951-201ENSMUST00000175330 64 ntBASIC15.32■□□□□ 0.04
Hoxc9P09633 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC15.32■□□□□ 0.04
Hoxc9P09633 Gm43163-201ENSMUST00000196571 442 ntBASIC15.32■□□□□ 0.04
Hoxc9P09633 Gm42816-201ENSMUST00000198433 325 ntBASIC15.32■□□□□ 0.04
Hoxc9P09633 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Hoxc9P09633 Gm5298-201ENSMUST00000201122 892 ntBASIC15.32■□□□□ 0.04
Hoxc9P09633 Gm3726-201ENSMUST00000203110 785 ntBASIC15.32■□□□□ 0.04
Hoxc9P09633 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC15.32■□□□□ 0.04
Hoxc9P09633 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc9P09633 Ap3s1-202ENSMUST00000224622 978 ntBASIC15.32■□□□□ 0.04
Hoxc9P09633 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc9P09633 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc9P09633 Gm16380-201ENSMUST00000077997 478 ntBASIC15.32■□□□□ 0.04
Hoxc9P09633 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc9P09633 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc9P09633 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc9P09633 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Hoxc9P09633 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc9P09633 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc9P09633 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc9P09633 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc9P09633 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Hoxc9P09633 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc9P09633 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc9P09633 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc9P09633 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hoxc9P09633 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Hoxc9P09633 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Hoxc9P09633 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc9P09633 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc9P09633 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc9P09633 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc9P09633 Gm37600-201ENSMUST00000193764 3292 ntBASIC15.31■□□□□ 0.04
Hoxc9P09633 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc9P09633 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc9P09633 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc9P09633 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC15.31■□□□□ 0.04
Hoxc9P09633 Gm4294-201ENSMUST00000105169 614 ntBASIC15.31■□□□□ 0.04
Hoxc9P09633 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC15.31■□□□□ 0.04
Hoxc9P09633 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc9P09633 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc9P09633 Gm19015-201ENSMUST00000184002 1189 ntBASIC15.31■□□□□ 0.04
Hoxc9P09633 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC15.31■□□□□ 0.04
Hoxc9P09633 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Hoxc9P09633 Gm39288-201ENSMUST00000210554 446 ntBASIC15.31■□□□□ 0.04
Hoxc9P09633 Gm5996-201ENSMUST00000211110 718 ntBASIC15.31■□□□□ 0.04
Hoxc9P09633 Gm4811-201ENSMUST00000220879 1220 ntBASIC15.31■□□□□ 0.04
Hoxc9P09633 CT010506.1-201ENSMUST00000223673 349 ntBASIC15.31■□□□□ 0.04
Hoxc9P09633 AC129308.3-201ENSMUST00000225652 524 ntBASIC15.31■□□□□ 0.04
Hoxc9P09633 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hoxc9P09633 Gm5805-201ENSMUST00000072779 456 ntBASIC15.31■□□□□ 0.04
Hoxc9P09633 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 114 ms