Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc8P09025 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc8P09025 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Hoxc8P09025 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc8P09025 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc8P09025 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Hoxc8P09025 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc8P09025 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc8P09025 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc8P09025 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.6□□□□□ -0.39
Hoxc8P09025 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc8P09025 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc8P09025 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc8P09025 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Hoxc8P09025 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Hoxc8P09025 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc8P09025 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc8P09025 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc8P09025 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.59□□□□□ -0.39
Hoxc8P09025 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc8P09025 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Hoxc8P09025 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc8P09025 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc8P09025 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Hoxc8P09025 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc8P09025 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc8P09025 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.59□□□□□ -0.39
Hoxc8P09025 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc8P09025 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc8P09025 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc8P09025 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Hoxc8P09025 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
Hoxc8P09025 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.59□□□□□ -0.39
Hoxc8P09025 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.59□□□□□ -0.39
Hoxc8P09025 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
Hoxc8P09025 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc8P09025 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc8P09025 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.59□□□□□ -0.39
Hoxc8P09025 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc8P09025 Gm11500-201ENSMUST00000118237 601 ntBASIC12.59□□□□□ -0.39
Hoxc8P09025 Gm12791-201ENSMUST00000120788 655 ntBASIC12.59□□□□□ -0.39
Hoxc8P09025 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.59□□□□□ -0.39
Hoxc8P09025 Gm22877-201ENSMUST00000175451 105 ntBASIC12.59□□□□□ -0.39
Hoxc8P09025 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.59□□□□□ -0.39
Hoxc8P09025 Gm21778-201ENSMUST00000178779 471 ntBASIC12.59□□□□□ -0.39
Hoxc8P09025 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.59□□□□□ -0.39
Hoxc8P09025 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC12.59□□□□□ -0.39
Hoxc8P09025 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.59□□□□□ -0.39
Hoxc8P09025 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.59□□□□□ -0.39
Hoxc8P09025 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.59□□□□□ -0.39
Hoxc8P09025 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc8P09025 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc8P09025 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.59□□□□□ -0.39
Hoxc8P09025 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.59□□□□□ -0.39
Hoxc8P09025 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.59□□□□□ -0.39
Hoxc8P09025 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.59□□□□□ -0.39
Hoxc8P09025 Gm5468-202ENSMUST00000227851 682 ntBASIC12.59□□□□□ -0.39
Hoxc8P09025 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc8P09025 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc8P09025 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc8P09025 n-R5s185-201ENSMUST00000083953 119 ntBASIC12.59□□□□□ -0.39
Hoxc8P09025 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Hoxc8P09025 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.59□□□□□ -0.39
Hoxc8P09025 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc8P09025 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc8P09025 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.59□□□□□ -0.39
Hoxc8P09025 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Hoxc8P09025 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc8P09025 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
Hoxc8P09025 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc8P09025 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc8P09025 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc8P09025 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Hoxc8P09025 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.58□□□□□ -0.39
Hoxc8P09025 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Hoxc8P09025 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc8P09025 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc8P09025 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc8P09025 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc8P09025 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Hoxc8P09025 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc8P09025 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc8P09025 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc8P09025 Gm13600-201ENSMUST00000117949 744 ntBASIC12.58□□□□□ -0.4
Hoxc8P09025 Gm12274-201ENSMUST00000120062 385 ntBASIC12.58□□□□□ -0.4
Hoxc8P09025 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.58□□□□□ -0.4
Hoxc8P09025 Gm15329-201ENSMUST00000121408 155 ntBASIC12.58□□□□□ -0.4
Hoxc8P09025 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc8P09025 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.58□□□□□ -0.4
Hoxc8P09025 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.58□□□□□ -0.4
Hoxc8P09025 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.58□□□□□ -0.4
Hoxc8P09025 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.58□□□□□ -0.4
Hoxc8P09025 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Hoxc8P09025 Gm43380-201ENSMUST00000200421 220 ntBASIC12.58□□□□□ -0.4
Hoxc8P09025 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc8P09025 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.58□□□□□ -0.4
Hoxc8P09025 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc8P09025 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Hoxc8P09025 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc8P09025 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms