Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
ApoeP08226 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
ApoeP08226 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
ApoeP08226 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
ApoeP08226 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.26□□□□□ -0.61
ApoeP08226 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
ApoeP08226 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ApoeP08226 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ApoeP08226 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
ApoeP08226 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.26□□□□□ -0.61
ApoeP08226 Gm4984-201ENSMUST00000115987 360 ntBASIC11.26□□□□□ -0.61
ApoeP08226 Gm13570-201ENSMUST00000140763 309 ntBASIC11.26□□□□□ -0.61
ApoeP08226 Gm23984-201ENSMUST00000157139 203 ntBASIC11.26□□□□□ -0.61
ApoeP08226 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
ApoeP08226 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ApoeP08226 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
ApoeP08226 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
ApoeP08226 Gm27847-201ENSMUST00000183711 107 ntBASIC11.26□□□□□ -0.61
ApoeP08226 Gm27375-201ENSMUST00000183799 107 ntBASIC11.26□□□□□ -0.61
ApoeP08226 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
ApoeP08226 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.26□□□□□ -0.61
ApoeP08226 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ApoeP08226 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.26□□□□□ -0.61
ApoeP08226 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.26□□□□□ -0.61
ApoeP08226 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.26□□□□□ -0.61
ApoeP08226 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ApoeP08226 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.26□□□□□ -0.61
ApoeP08226 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ApoeP08226 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
ApoeP08226 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ApoeP08226 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
ApoeP08226 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
ApoeP08226 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
ApoeP08226 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.26□□□□□ -0.61
ApoeP08226 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ApoeP08226 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ApoeP08226 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ApoeP08226 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.26□□□□□ -0.61
ApoeP08226 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ApoeP08226 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
ApoeP08226 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
ApoeP08226 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
ApoeP08226 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.26□□□□□ -0.61
ApoeP08226 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.26□□□□□ -0.61
ApoeP08226 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
ApoeP08226 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ApoeP08226 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
ApoeP08226 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
ApoeP08226 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.25□□□□□ -0.61
ApoeP08226 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.25□□□□□ -0.61
ApoeP08226 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.25□□□□□ -0.61
ApoeP08226 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.25□□□□□ -0.61
ApoeP08226 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.25□□□□□ -0.61
ApoeP08226 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.25□□□□□ -0.61
ApoeP08226 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.25□□□□□ -0.61
ApoeP08226 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.25□□□□□ -0.61
ApoeP08226 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.25□□□□□ -0.61
ApoeP08226 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.25□□□□□ -0.61
ApoeP08226 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.25□□□□□ -0.61
ApoeP08226 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
ApoeP08226 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.25□□□□□ -0.61
ApoeP08226 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.25□□□□□ -0.61
ApoeP08226 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Gm27682-201ENSMUST00000183930 110 ntBASIC11.25□□□□□ -0.61
ApoeP08226 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.25□□□□□ -0.61
ApoeP08226 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC11.25□□□□□ -0.61
ApoeP08226 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
ApoeP08226 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
ApoeP08226 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
ApoeP08226 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
ApoeP08226 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms