Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa4P06798 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa4P06798 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa4P06798 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa4P06798 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa4P06798 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.73□□□□□ -0.53
Hoxa4P06798 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Hoxa4P06798 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Hoxa4P06798 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Hoxa4P06798 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa4P06798 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Hoxa4P06798 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.72□□□□□ -0.53
Hoxa4P06798 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Hoxa4P06798 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.72□□□□□ -0.53
Hoxa4P06798 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Hoxa4P06798 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Hoxa4P06798 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.72□□□□□ -0.53
Hoxa4P06798 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.72□□□□□ -0.53
Hoxa4P06798 Gm13461-201ENSMUST00000120980 662 ntBASIC11.72□□□□□ -0.53
Hoxa4P06798 Gm11960-201ENSMUST00000122068 925 ntBASIC11.72□□□□□ -0.53
Hoxa4P06798 Gm26047-201ENSMUST00000157308 113 ntBASIC11.72□□□□□ -0.53
Hoxa4P06798 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.72□□□□□ -0.53
Hoxa4P06798 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.72□□□□□ -0.53
Hoxa4P06798 Gm10807-201ENSMUST00000177134 795 ntBASIC11.72□□□□□ -0.53
Hoxa4P06798 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.72□□□□□ -0.53
Hoxa4P06798 Gm5982-201ENSMUST00000196234 512 ntBASIC11.72□□□□□ -0.53
Hoxa4P06798 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.72□□□□□ -0.53
Hoxa4P06798 Gm26047-202ENSMUST00000198840 115 ntBASIC11.72□□□□□ -0.53
Hoxa4P06798 Gm6905-201ENSMUST00000205729 511 ntBASIC11.72□□□□□ -0.53
Hoxa4P06798 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.72□□□□□ -0.53
Hoxa4P06798 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.72□□□□□ -0.53
Hoxa4P06798 Gm7940-201ENSMUST00000218195 769 ntBASIC11.72□□□□□ -0.53
Hoxa4P06798 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.72□□□□□ -0.53
Hoxa4P06798 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.72□□□□□ -0.53
Hoxa4P06798 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.72□□□□□ -0.53
Hoxa4P06798 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Cog3-203ENSMUST00000227473 4197 ntBASIC11.72□□□□□ -0.53
Hoxa4P06798 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.72□□□□□ -0.53
Hoxa4P06798 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.72□□□□□ -0.53
Hoxa4P06798 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.72□□□□□ -0.53
Hoxa4P06798 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa4P06798 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa4P06798 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa4P06798 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa4P06798 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa4P06798 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Hoxa4P06798 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa4P06798 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa4P06798 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa4P06798 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Hoxa4P06798 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa4P06798 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa4P06798 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Hoxa4P06798 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa4P06798 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.71□□□□□ -0.53
Hoxa4P06798 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa4P06798 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa4P06798 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa4P06798 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa4P06798 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa4P06798 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Hoxa4P06798 Gm11700-201ENSMUST00000119409 403 ntBASIC11.71□□□□□ -0.53
Hoxa4P06798 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa4P06798 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Hoxa4P06798 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa4P06798 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms