Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Krt1P04104 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Krt1P04104 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Krt1P04104 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Krt1P04104 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Krt1P04104 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.22□□□□□ -0.61
Krt1P04104 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Krt1P04104 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.22□□□□□ -0.61
Krt1P04104 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.22□□□□□ -0.61
Krt1P04104 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.22□□□□□ -0.61
Krt1P04104 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.22□□□□□ -0.61
Krt1P04104 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.22□□□□□ -0.61
Krt1P04104 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Krt1P04104 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.22□□□□□ -0.61
Krt1P04104 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.22□□□□□ -0.61
Krt1P04104 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Krt1P04104 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Krt1P04104 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Krt1P04104 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Krt1P04104 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Krt1P04104 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Krt1P04104 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Krt1P04104 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Krt1P04104 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Krt1P04104 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Krt1P04104 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Krt1P04104 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Krt1P04104 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Krt1P04104 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.22□□□□□ -0.61
Krt1P04104 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Krt1P04104 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Krt1P04104 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Krt1P04104 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt1P04104 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt1P04104 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.21□□□□□ -0.61
Krt1P04104 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt1P04104 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt1P04104 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt1P04104 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Krt1P04104 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt1P04104 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt1P04104 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Krt1P04104 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt1P04104 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Krt1P04104 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Krt1P04104 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.21□□□□□ -0.61
Krt1P04104 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC11.21□□□□□ -0.61
Krt1P04104 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.21□□□□□ -0.61
Krt1P04104 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Krt1P04104 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.21□□□□□ -0.61
Krt1P04104 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Krt1P04104 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt1P04104 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.21□□□□□ -0.61
Krt1P04104 Gm23935-201ENSMUST00000102303 57 ntBASIC11.21□□□□□ -0.61
Krt1P04104 Gm24270-201ENSMUST00000102326 57 ntBASIC11.21□□□□□ -0.61
Krt1P04104 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Krt1P04104 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Krt1P04104 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt1P04104 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.21□□□□□ -0.61
Krt1P04104 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.21□□□□□ -0.61
Krt1P04104 Gm15487-201ENSMUST00000122373 465 ntBASIC11.21□□□□□ -0.61
Krt1P04104 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.21□□□□□ -0.61
Krt1P04104 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Krt1P04104 Gm24245-201ENSMUST00000157318 57 ntBASIC11.21□□□□□ -0.61
Krt1P04104 Gm27989-201ENSMUST00000184721 107 ntBASIC11.21□□□□□ -0.61
Krt1P04104 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.21□□□□□ -0.61
Krt1P04104 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Krt1P04104 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt1P04104 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Krt1P04104 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt1P04104 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Krt1P04104 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Krt1P04104 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.21□□□□□ -0.62
Krt1P04104 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.21□□□□□ -0.62
Krt1P04104 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
Krt1P04104 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Krt1P04104 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.21□□□□□ -0.62
Krt1P04104 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Krt1P04104 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Krt1P04104 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Krt1P04104 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt1P04104 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt1P04104 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Krt1P04104 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt1P04104 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt1P04104 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Krt1P04104 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Krt1P04104 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt1P04104 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Krt1P04104 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt1P04104 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Krt1P04104 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Krt1P04104 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt1P04104 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Krt1P04104 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt1P04104 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Krt1P04104 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Krt1P04104 Gm13315-201ENSMUST00000120376 991 ntBASIC11.2□□□□□ -0.62
Krt1P04104 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.2□□□□□ -0.62
Krt1P04104 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms