Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
TcraP01849 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC8.68□□□□□ -1.02
TcraP01849 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
TcraP01849 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
TcraP01849 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Gm5687-201ENSMUST00000118252 640 ntBASIC8.68□□□□□ -1.02
TcraP01849 Gm12384-201ENSMUST00000119228 919 ntBASIC8.68□□□□□ -1.02
TcraP01849 Gm14704-201ENSMUST00000120300 874 ntBASIC8.68□□□□□ -1.02
TcraP01849 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC8.68□□□□□ -1.02
TcraP01849 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC8.68□□□□□ -1.02
TcraP01849 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC8.68□□□□□ -1.02
TcraP01849 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC8.68□□□□□ -1.02
TcraP01849 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC8.68□□□□□ -1.02
TcraP01849 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
TcraP01849 Gm27701-201ENSMUST00000184498 110 ntBASIC8.68□□□□□ -1.02
TcraP01849 Gm4034-201ENSMUST00000187674 480 ntBASIC8.68□□□□□ -1.02
TcraP01849 Gm28693-202ENSMUST00000190758 331 ntBASIC8.68□□□□□ -1.02
TcraP01849 Ighv5-13-201ENSMUST00000193550 290 ntBASIC8.68□□□□□ -1.02
TcraP01849 Gm44064-201ENSMUST00000204964 1087 ntBASIC8.68□□□□□ -1.02
TcraP01849 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC8.68□□□□□ -1.02
TcraP01849 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC8.68□□□□□ -1.02
TcraP01849 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC8.68□□□□□ -1.02
TcraP01849 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC8.68□□□□□ -1.02
TcraP01849 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
TcraP01849 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC8.68□□□□□ -1.02
TcraP01849 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC8.68□□□□□ -1.02
TcraP01849 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC8.68□□□□□ -1.02
TcraP01849 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC8.68□□□□□ -1.02
TcraP01849 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
TcraP01849 Gm10339-203ENSMUST00000225409 1671 ntBASIC8.68□□□□□ -1.02
TcraP01849 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
TcraP01849 Gm7642-201ENSMUST00000216345 1809 ntBASIC8.68□□□□□ -1.02
TcraP01849 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
TcraP01849 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC8.68□□□□□ -1.02
TcraP01849 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
TcraP01849 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
TcraP01849 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC8.67□□□□□ -1.02
TcraP01849 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Gm21939-201ENSMUST00000221137 2773 ntBASIC8.67□□□□□ -1.02
TcraP01849 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
TcraP01849 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC8.67□□□□□ -1.02
TcraP01849 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
TcraP01849 Gm13135-201ENSMUST00000117628 3121 ntBASIC8.67□□□□□ -1.02
TcraP01849 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC8.67□□□□□ -1.02
TcraP01849 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC8.67□□□□□ -1.02
TcraP01849 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
TcraP01849 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC8.67□□□□□ -1.02
TcraP01849 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Gm6473-201ENSMUST00000188572 1210 ntBASIC8.67□□□□□ -1.02
TcraP01849 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC8.67□□□□□ -1.02
TcraP01849 Gm45191-201ENSMUST00000205846 5439 ntBASIC8.67□□□□□ -1.02
TcraP01849 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC8.67□□□□□ -1.02
TcraP01849 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
TcraP01849 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC8.67□□□□□ -1.02
TcraP01849 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC8.67□□□□□ -1.02
TcraP01849 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TcraP01849 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC8.67□□□□□ -1.02
TcraP01849 AC108858.2-201ENSMUST00000228186 1425 ntBASIC8.67□□□□□ -1.02
TcraP01849 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms