Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Hcn1O88704 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.43□□□□□ -0.58
Hcn1O88704 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.43□□□□□ -0.58
Hcn1O88704 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hcn1O88704 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hcn1O88704 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Hcn1O88704 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Hcn1O88704 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Hcn1O88704 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.43□□□□□ -0.58
Hcn1O88704 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.43□□□□□ -0.58
Hcn1O88704 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Hcn1O88704 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hcn1O88704 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hcn1O88704 Gm23119-201ENSMUST00000158610 140 ntBASIC11.43□□□□□ -0.58
Hcn1O88704 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.43□□□□□ -0.58
Hcn1O88704 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hcn1O88704 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.43□□□□□ -0.58
Hcn1O88704 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hcn1O88704 Gm42937-201ENSMUST00000197360 752 ntBASIC11.43□□□□□ -0.58
Hcn1O88704 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.43□□□□□ -0.58
Hcn1O88704 Gm13097-201ENSMUST00000210722 397 ntBASIC11.43□□□□□ -0.58
Hcn1O88704 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hcn1O88704 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hcn1O88704 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Hcn1O88704 Gm24136-201ENSMUST00000083374 165 ntBASIC11.43□□□□□ -0.58
Hcn1O88704 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hcn1O88704 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.43□□□□□ -0.58
Hcn1O88704 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hcn1O88704 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hcn1O88704 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Hcn1O88704 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hcn1O88704 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.43□□□□□ -0.58
Hcn1O88704 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hcn1O88704 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hcn1O88704 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hcn1O88704 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Hcn1O88704 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Hcn1O88704 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Hcn1O88704 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 Gm24830-201ENSMUST00000102024 166 ntBASIC11.42□□□□□ -0.58
Hcn1O88704 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Hcn1O88704 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Hcn1O88704 Mir877-201ENSMUST00000104738 85 ntBASIC11.42□□□□□ -0.58
Hcn1O88704 Gm9083-201ENSMUST00000120423 819 ntBASIC11.42□□□□□ -0.58
Hcn1O88704 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.42□□□□□ -0.58
Hcn1O88704 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.42□□□□□ -0.58
Hcn1O88704 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.42□□□□□ -0.58
Hcn1O88704 Gm15276-201ENSMUST00000145953 498 ntBASIC11.42□□□□□ -0.58
Hcn1O88704 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.42□□□□□ -0.58
Hcn1O88704 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Hcn1O88704 Gm25890-201ENSMUST00000177643 165 ntBASIC11.42□□□□□ -0.58
Hcn1O88704 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.42□□□□□ -0.58
Hcn1O88704 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.42□□□□□ -0.58
Hcn1O88704 Gm22614-201ENSMUST00000178300 165 ntBASIC11.42□□□□□ -0.58
Hcn1O88704 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Hcn1O88704 Gm38317-201ENSMUST00000195564 343 ntBASIC11.42□□□□□ -0.58
Hcn1O88704 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.42□□□□□ -0.58
Hcn1O88704 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.42□□□□□ -0.58
Hcn1O88704 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 Gm10312-201ENSMUST00000078515 489 ntBASIC11.42□□□□□ -0.58
Hcn1O88704 Gm22042-201ENSMUST00000082989 165 ntBASIC11.42□□□□□ -0.58
Hcn1O88704 Gm26232-201ENSMUST00000083360 166 ntBASIC11.42□□□□□ -0.58
Hcn1O88704 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.42□□□□□ -0.58
Hcn1O88704 Gm26110-201ENSMUST00000083971 165 ntBASIC11.42□□□□□ -0.58
Hcn1O88704 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Hcn1O88704 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Hcn1O88704 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.42□□□□□ -0.58
Hcn1O88704 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.42□□□□□ -0.58
Hcn1O88704 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.42□□□□□ -0.58
Hcn1O88704 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hcn1O88704 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hcn1O88704 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hcn1O88704 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.41□□□□□ -0.58
Hcn1O88704 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms