Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
BckdkO55028 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
BckdkO55028 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
BckdkO55028 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
BckdkO55028 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
BckdkO55028 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
BckdkO55028 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
BckdkO55028 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
BckdkO55028 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
BckdkO55028 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.08□□□□□ -0.64
BckdkO55028 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
BckdkO55028 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
BckdkO55028 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
BckdkO55028 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.08□□□□□ -0.64
BckdkO55028 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.08□□□□□ -0.64
BckdkO55028 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.08□□□□□ -0.64
BckdkO55028 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
BckdkO55028 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.08□□□□□ -0.64
BckdkO55028 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
BckdkO55028 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
BckdkO55028 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.08□□□□□ -0.64
BckdkO55028 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
BckdkO55028 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
BckdkO55028 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
BckdkO55028 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
BckdkO55028 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.08□□□□□ -0.64
BckdkO55028 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
BckdkO55028 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
BckdkO55028 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
BckdkO55028 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
BckdkO55028 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.07□□□□□ -0.64
BckdkO55028 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.07□□□□□ -0.64
BckdkO55028 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Gm8913-201ENSMUST00000209491 641 ntBASIC11.07□□□□□ -0.64
BckdkO55028 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
BckdkO55028 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
BckdkO55028 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.07□□□□□ -0.64
BckdkO55028 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.07□□□□□ -0.64
BckdkO55028 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.07□□□□□ -0.64
BckdkO55028 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
BckdkO55028 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.07□□□□□ -0.64
BckdkO55028 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BckdkO55028 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BckdkO55028 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BckdkO55028 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BckdkO55028 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
BckdkO55028 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
BckdkO55028 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
BckdkO55028 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.06□□□□□ -0.64
BckdkO55028 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.06□□□□□ -0.64
BckdkO55028 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
BckdkO55028 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BckdkO55028 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BckdkO55028 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BckdkO55028 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BckdkO55028 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
BckdkO55028 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BckdkO55028 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
BckdkO55028 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
BckdkO55028 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
BckdkO55028 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
BckdkO55028 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BckdkO55028 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
BckdkO55028 Gm12217-201ENSMUST00000118858 696 ntBASIC11.06□□□□□ -0.64
BckdkO55028 Gm14208-201ENSMUST00000119645 678 ntBASIC11.06□□□□□ -0.64
BckdkO55028 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.06□□□□□ -0.64
BckdkO55028 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
BckdkO55028 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
BckdkO55028 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms