Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Npc1O35604 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.64□□□□□ -0.55
Npc1O35604 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.64□□□□□ -0.55
Npc1O35604 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Npc1O35604 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npc1O35604 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npc1O35604 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npc1O35604 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npc1O35604 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npc1O35604 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.63□□□□□ -0.55
Npc1O35604 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Npc1O35604 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npc1O35604 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npc1O35604 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Npc1O35604 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npc1O35604 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npc1O35604 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npc1O35604 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npc1O35604 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npc1O35604 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npc1O35604 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Npc1O35604 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.63□□□□□ -0.55
Npc1O35604 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Npc1O35604 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Npc1O35604 Gm15711-201ENSMUST00000118889 535 ntBASIC11.63□□□□□ -0.55
Npc1O35604 Gm12380-201ENSMUST00000119012 544 ntBASIC11.63□□□□□ -0.55
Npc1O35604 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Npc1O35604 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.63□□□□□ -0.55
Npc1O35604 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.63□□□□□ -0.55
Npc1O35604 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.63□□□□□ -0.55
Npc1O35604 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.63□□□□□ -0.55
Npc1O35604 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Npc1O35604 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Npc1O35604 Gm7003-201ENSMUST00000195089 312 ntBASIC11.63□□□□□ -0.55
Npc1O35604 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.63□□□□□ -0.55
Npc1O35604 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Npc1O35604 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Npc1O35604 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Npc1O35604 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npc1O35604 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npc1O35604 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Npc1O35604 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npc1O35604 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npc1O35604 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Npc1O35604 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Npc1O35604 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npc1O35604 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npc1O35604 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npc1O35604 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Npc1O35604 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.62□□□□□ -0.55
Npc1O35604 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npc1O35604 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Npc1O35604 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Npc1O35604 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Npc1O35604 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Npc1O35604 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npc1O35604 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npc1O35604 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npc1O35604 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.62□□□□□ -0.55
Npc1O35604 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npc1O35604 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npc1O35604 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npc1O35604 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Npc1O35604 Gm15610-201ENSMUST00000120584 195 ntBASIC11.62□□□□□ -0.55
Npc1O35604 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.62□□□□□ -0.55
Npc1O35604 Gm18734-201ENSMUST00000172937 808 ntBASIC11.62□□□□□ -0.55
Npc1O35604 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.62□□□□□ -0.55
Npc1O35604 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.62□□□□□ -0.55
Npc1O35604 AU022133-201ENSMUST00000200601 873 ntBASIC11.62□□□□□ -0.55
Npc1O35604 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Npc1O35604 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.62□□□□□ -0.55
Npc1O35604 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.62□□□□□ -0.55
Npc1O35604 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.62□□□□□ -0.55
Npc1O35604 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.62□□□□□ -0.55
Npc1O35604 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npc1O35604 Gm26448-201ENSMUST00000082446 203 ntBASIC11.62□□□□□ -0.55
Npc1O35604 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npc1O35604 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npc1O35604 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npc1O35604 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npc1O35604 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npc1O35604 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.62□□□□□ -0.55
Npc1O35604 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Npc1O35604 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Npc1O35604 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npc1O35604 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.62□□□□□ -0.55
Npc1O35604 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npc1O35604 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npc1O35604 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npc1O35604 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Npc1O35604 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npc1O35604 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Npc1O35604 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms