Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.35□□□□□ -0.27
Stx1aO35526 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Stx1aO35526 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Stx1aO35526 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Stx1aO35526 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Stx1aO35526 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Stx1aO35526 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC13.35□□□□□ -0.27
Stx1aO35526 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Stx1aO35526 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Stx1aO35526 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Stx1aO35526 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Stx1aO35526 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Stx1aO35526 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Stx1aO35526 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Stx1aO35526 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Stx1aO35526 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Stx1aO35526 Gm11478-201ENSMUST00000117851 599 ntBASIC13.34□□□□□ -0.27
Stx1aO35526 Gm12390-201ENSMUST00000117897 397 ntBASIC13.34□□□□□ -0.27
Stx1aO35526 Gm5419-201ENSMUST00000119301 527 ntBASIC13.34□□□□□ -0.27
Stx1aO35526 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.34□□□□□ -0.27
Stx1aO35526 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC13.34□□□□□ -0.27
Stx1aO35526 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.34□□□□□ -0.27
Stx1aO35526 Gm6114-201ENSMUST00000182472 968 ntBASIC13.34□□□□□ -0.27
Stx1aO35526 Gm2546-201ENSMUST00000182630 991 ntBASIC13.34□□□□□ -0.27
Stx1aO35526 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.34□□□□□ -0.27
Stx1aO35526 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.34□□□□□ -0.27
Stx1aO35526 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Stx1aO35526 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Stx1aO35526 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.34□□□□□ -0.27
Stx1aO35526 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Stx1aO35526 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Stx1aO35526 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Stx1aO35526 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Stx1aO35526 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Stx1aO35526 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Stx1aO35526 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Stx1aO35526 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.34□□□□□ -0.27
Stx1aO35526 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Stx1aO35526 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.34□□□□□ -0.27
Stx1aO35526 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Stx1aO35526 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Stx1aO35526 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Stx1aO35526 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Stx1aO35526 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Stx1aO35526 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Stx1aO35526 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Stx1aO35526 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Stx1aO35526 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Stx1aO35526 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.27
Stx1aO35526 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Stx1aO35526 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC13.33□□□□□ -0.28
Stx1aO35526 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Stx1aO35526 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Stx1aO35526 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Stx1aO35526 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Stx1aO35526 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Stx1aO35526 Gm5859-201ENSMUST00000165401 2324 ntBASIC13.33□□□□□ -0.28
Stx1aO35526 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Stx1aO35526 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Stx1aO35526 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Stx1aO35526 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
Stx1aO35526 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Stx1aO35526 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Stx1aO35526 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Stx1aO35526 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.33□□□□□ -0.28
Stx1aO35526 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.33□□□□□ -0.28
Stx1aO35526 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.33□□□□□ -0.28
Stx1aO35526 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Stx1aO35526 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Stx1aO35526 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Stx1aO35526 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.33□□□□□ -0.28
Stx1aO35526 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Stx1aO35526 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Stx1aO35526 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Stx1aO35526 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Stx1aO35526 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.33□□□□□ -0.28
Stx1aO35526 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Stx1aO35526 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Stx1aO35526 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Stx1aO35526 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Stx1aO35526 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Stx1aO35526 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Stx1aO35526 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Stx1aO35526 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Stx1aO35526 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Stx1aO35526 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Stx1aO35526 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Stx1aO35526 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Stx1aO35526 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Stx1aO35526 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Stx1aO35526 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Stx1aO35526 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Stx1aO35526 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Stx1aO35526 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Stx1aO35526 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Stx1aO35526 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Stx1aO35526 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Stx1aO35526 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.32□□□□□ -0.28
Stx1aO35526 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Stx1aO35526 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms