Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Gm9192-201ENSMUST00000183221 985 ntBASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Mir8109-201ENSMUST00000184375 117 ntBASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Gm6621-201ENSMUST00000193251 772 ntBASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Gm43002-201ENSMUST00000200310 155 ntBASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Gm10312-201ENSMUST00000078515 489 ntBASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Gm38266-201ENSMUST00000194931 421 ntBASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Gm30285-201ENSMUST00000214614 422 ntBASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh9F8VPK8 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh9F8VPK8 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh9F8VPK8 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh9F8VPK8 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh9F8VPK8 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdh9F8VPK8 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdh9F8VPK8 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh9F8VPK8 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.17□□□□□ -0.46
Pcdh9F8VPK8 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.17□□□□□ -0.46
Pcdh9F8VPK8 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh9F8VPK8 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pcdh9F8VPK8 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdh9F8VPK8 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.17□□□□□ -0.46
Pcdh9F8VPK8 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.17□□□□□ -0.46
Pcdh9F8VPK8 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms