Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh17E9PXF0 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh17E9PXF0 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.14□□□□□ -0.63
Pcdh17E9PXF0 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh17E9PXF0 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Pcdh17E9PXF0 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.14□□□□□ -0.63
Pcdh17E9PXF0 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh17E9PXF0 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh17E9PXF0 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh17E9PXF0 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh17E9PXF0 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh17E9PXF0 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.14□□□□□ -0.63
Pcdh17E9PXF0 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh17E9PXF0 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh17E9PXF0 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh17E9PXF0 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Gm5733-201ENSMUST00000190232 939 ntBASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Gm45770-201ENSMUST00000212105 616 ntBASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Gm1821-202ENSMUST00000227415 750 ntBASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh17E9PXF0 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Gm11509-201ENSMUST00000117358 325 ntBASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Gm12857-201ENSMUST00000117678 592 ntBASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Gm23085-201ENSMUST00000157849 293 ntBASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Gm7467-201ENSMUST00000185173 652 ntBASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Gm3508-201ENSMUST00000186012 792 ntBASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Gm37835-201ENSMUST00000193305 361 ntBASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms