Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn3aA2ASI5 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Gm29410-201ENSMUST00000188383 694 ntBASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Gm42816-201ENSMUST00000198433 325 ntBASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Gm45120-201ENSMUST00000208880 408 ntBASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.16□□□□□ -0.3
Scn3aA2ASI5 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Gm12030-201ENSMUST00000121917 223 ntBASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Gm45594-201ENSMUST00000211717 241 ntBASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Gm30671-201ENSMUST00000214898 318 ntBASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.15□□□□□ -0.3
Scn3aA2ASI5 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Gm25148-201ENSMUST00000104611 123 ntBASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Gm13182-201ENSMUST00000122241 312 ntBASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Gm17798-201ENSMUST00000182282 1035 ntBASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Gm37826-201ENSMUST00000195329 322 ntBASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Gm42657-201ENSMUST00000201746 211 ntBASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Gm18561-201ENSMUST00000206027 804 ntBASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Gm18065-201ENSMUST00000221395 526 ntBASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn3aA2ASI5 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Scn3aA2ASI5 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Scn3aA2ASI5 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Scn3aA2ASI5 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.15□□□□□ -0.31
Scn3aA2ASI5 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn3aA2ASI5 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.14□□□□□ -0.31
Scn3aA2ASI5 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn3aA2ASI5 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn3aA2ASI5 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn3aA2ASI5 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn3aA2ASI5 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn3aA2ASI5 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.14□□□□□ -0.31
Scn3aA2ASI5 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn3aA2ASI5 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn3aA2ASI5 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn3aA2ASI5 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms