Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Ubr4A2AN08 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Ubr4A2AN08 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ubr4A2AN08 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ubr4A2AN08 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ubr4A2AN08 AC126262.1-201ENSMUST00000221802 1904 ntBASIC6.09□□□□□ -1.43
Ubr4A2AN08 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ubr4A2AN08 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ubr4A2AN08 Ssr1-203ENSMUST00000225246 1825 ntBASIC6.09□□□□□ -1.43
Ubr4A2AN08 Gm14571-201ENSMUST00000118292 570 ntBASIC6.09□□□□□ -1.43
Ubr4A2AN08 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC6.09□□□□□ -1.43
Ubr4A2AN08 Gm9369-201ENSMUST00000196009 733 ntBASIC6.09□□□□□ -1.43
Ubr4A2AN08 Gm39348-201ENSMUST00000216861 640 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Ubr4A2AN08 Gm8960-201ENSMUST00000219787 788 ntBASIC6.09□□□□□ -1.43
Ubr4A2AN08 Gm18749-201ENSMUST00000222410 692 ntBASIC6.09□□□□□ -1.43
Ubr4A2AN08 CT030170.2-201ENSMUST00000223267 126 ntBASIC6.09□□□□□ -1.43
Ubr4A2AN08 Gm5424-201ENSMUST00000053865 1240 ntBASIC6.09□□□□□ -1.43
Ubr4A2AN08 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Ubr4A2AN08 Gm3836-201ENSMUST00000211377 1613 ntBASIC6.09□□□□□ -1.43
Ubr4A2AN08 Them7-201ENSMUST00000068813 1556 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ubr4A2AN08 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Ubr4A2AN08 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC6.09□□□□□ -1.44
Ubr4A2AN08 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Ubr4A2AN08 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Ubr4A2AN08 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Ubr4A2AN08 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Ubr4A2AN08 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Ubr4A2AN08 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Ubr4A2AN08 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Ubr4A2AN08 Gm3355-201ENSMUST00000160079 487 ntBASIC6.09□□□□□ -1.44
Ubr4A2AN08 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Ubr4A2AN08 Gm26943-201ENSMUST00000182295 957 ntBASIC6.09□□□□□ -1.44
Ubr4A2AN08 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC6.09□□□□□ -1.44
Ubr4A2AN08 Gm44721-201ENSMUST00000206978 472 ntBASIC6.09□□□□□ -1.44
Ubr4A2AN08 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
Ubr4A2AN08 4930525C09Rik-201ENSMUST00000217919 677 ntTSL 3 BASIC6.09□□□□□ -1.44
Ubr4A2AN08 Hsd17b3-204ENSMUST00000222783 1184 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Ubr4A2AN08 AC164437.3-201ENSMUST00000228323 347 ntBASIC6.09□□□□□ -1.44
Ubr4A2AN08 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Ubr4A2AN08 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Ubr4A2AN08 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Ubr4A2AN08 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Gm12904-201ENSMUST00000117451 1399 ntBASIC6.08□□□□□ -1.44
Ubr4A2AN08 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Gm23916-201ENSMUST00000158484 399 ntBASIC6.08□□□□□ -1.44
Ubr4A2AN08 Gm37723-201ENSMUST00000194480 565 ntBASIC6.08□□□□□ -1.44
Ubr4A2AN08 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
Ubr4A2AN08 AC163351.1-201ENSMUST00000225539 737 ntBASIC6.08□□□□□ -1.44
Ubr4A2AN08 AC102847.1-202ENSMUST00000226313 1245 ntBASIC6.08□□□□□ -1.44
Ubr4A2AN08 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Gm18299-201ENSMUST00000192026 636 ntBASIC6.08□□□□□ -1.44
Ubr4A2AN08 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Ubr4A2AN08 AC165260.2-201ENSMUST00000225371 395 ntBASIC6.08□□□□□ -1.44
Ubr4A2AN08 AC154407.1-201ENSMUST00000226777 526 ntBASIC6.08□□□□□ -1.44
Ubr4A2AN08 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC6.08□□□□□ -1.44
Ubr4A2AN08 Gm2420-201ENSMUST00000119864 2149 ntBASIC6.08□□□□□ -1.44
Ubr4A2AN08 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Gm20474-201ENSMUST00000180089 596 ntBASIC6.08□□□□□ -1.44
Ubr4A2AN08 Gm17764-201ENSMUST00000185925 391 ntBASIC6.08□□□□□ -1.44
Ubr4A2AN08 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Gm19931-201ENSMUST00000198920 368 ntBASIC6.08□□□□□ -1.44
Ubr4A2AN08 4933439N14Rik-201ENSMUST00000211062 1087 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 AC163646.3-202ENSMUST00000228685 691 ntBASIC6.08□□□□□ -1.44
Ubr4A2AN08 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 AC125487.1-201ENSMUST00000217888 1300 ntBASIC6.08□□□□□ -1.44
Ubr4A2AN08 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms