Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap99A0A140LIX9 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap99A0A140LIX9 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cfap99A0A140LIX9 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Cfap99A0A140LIX9 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap99A0A140LIX9 Gm23085-201ENSMUST00000157849 293 ntBASIC14.25□□□□□ -0.13
Cfap99A0A140LIX9 Gm17391-201ENSMUST00000171036 126 ntBASIC14.25□□□□□ -0.13
Cfap99A0A140LIX9 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14.25□□□□□ -0.13
Cfap99A0A140LIX9 Gm4034-201ENSMUST00000187674 480 ntBASIC14.25□□□□□ -0.13
Cfap99A0A140LIX9 Gm5733-201ENSMUST00000190232 939 ntBASIC14.25□□□□□ -0.13
Cfap99A0A140LIX9 Gm43058-201ENSMUST00000197645 625 ntBASIC14.25□□□□□ -0.13
Cfap99A0A140LIX9 AC166992.1-201ENSMUST00000216356 565 ntBASIC14.25□□□□□ -0.13
Cfap99A0A140LIX9 Gm807-202ENSMUST00000224929 408 ntBASIC14.25□□□□□ -0.13
Cfap99A0A140LIX9 AC140293.1-201ENSMUST00000225626 1247 ntBASIC14.25□□□□□ -0.13
Cfap99A0A140LIX9 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap99A0A140LIX9 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap99A0A140LIX9 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap99A0A140LIX9 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap99A0A140LIX9 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.25□□□□□ -0.13
Cfap99A0A140LIX9 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap99A0A140LIX9 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC14.25□□□□□ -0.13
Cfap99A0A140LIX9 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap99A0A140LIX9 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap99A0A140LIX9 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap99A0A140LIX9 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.25□□□□□ -0.13
Cfap99A0A140LIX9 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap99A0A140LIX9 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 AC156031.2-201ENSMUST00000213107 3310 ntBASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Gm5455-201ENSMUST00000058710 715 ntBASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Ginm1-202ENSMUST00000065124 300 ntBASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cfap99A0A140LIX9 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC14.23□□□□□ -0.13
Cfap99A0A140LIX9 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms