Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.44□□□□□ -0.58
Ube4bQ9ES00 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.44□□□□□ -0.58
Ube4bQ9ES00 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.44□□□□□ -0.58
Ube4bQ9ES00 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.44□□□□□ -0.58
Ube4bQ9ES00 Gm44882-201ENSMUST00000205702 802 ntBASIC11.44□□□□□ -0.58
Ube4bQ9ES00 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.44□□□□□ -0.58
Ube4bQ9ES00 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.44□□□□□ -0.58
Ube4bQ9ES00 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Ube4bQ9ES00 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.44□□□□□ -0.58
Ube4bQ9ES00 Gm5186-201ENSMUST00000218781 920 ntBASIC11.44□□□□□ -0.58
Ube4bQ9ES00 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.44□□□□□ -0.58
Ube4bQ9ES00 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.44□□□□□ -0.58
Ube4bQ9ES00 AC154532.1-201ENSMUST00000227860 965 ntBASIC11.44□□□□□ -0.58
Ube4bQ9ES00 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ube4bQ9ES00 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ube4bQ9ES00 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Ube4bQ9ES00 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ube4bQ9ES00 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ube4bQ9ES00 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ube4bQ9ES00 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Ube4bQ9ES00 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ube4bQ9ES00 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ube4bQ9ES00 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ube4bQ9ES00 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ube4bQ9ES00 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ube4bQ9ES00 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ube4bQ9ES00 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ube4bQ9ES00 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ube4bQ9ES00 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ube4bQ9ES00 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube4bQ9ES00 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.42□□□□□ -0.58
Ube4bQ9ES00 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Gm13612-201ENSMUST00000119276 390 ntBASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Gm4034-201ENSMUST00000187674 480 ntBASIC11.42□□□□□ -0.58
Ube4bQ9ES00 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Gm38671-201ENSMUST00000200573 130 ntBASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Gm7287-201ENSMUST00000205267 602 ntBASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.42□□□□□ -0.58
Ube4bQ9ES00 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms