Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Gm26368-201ENSMUST00000157826 118 ntBASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Gm24679-201ENSMUST00000158762 111 ntBASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Gm16167-201ENSMUST00000160428 1065 ntBASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Gm17192-201ENSMUST00000169031 511 ntBASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Gm25998-201ENSMUST00000175397 53 ntBASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Gm28833-201ENSMUST00000189671 559 ntBASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Gm37852-201ENSMUST00000193027 350 ntBASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Gm25053-202ENSMUST00000199731 132 ntBASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Gm6450-201ENSMUST00000200896 574 ntBASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Gm7940-201ENSMUST00000218195 769 ntBASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 AC158388.3-202ENSMUST00000225517 775 ntBASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-4Q9EQM3 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-4Q9EQM3 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.21□□□□□ -0.45
Nkx2-4Q9EQM3 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.21□□□□□ -0.45
Nkx2-4Q9EQM3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-4Q9EQM3 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Nkx2-4Q9EQM3 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-4Q9EQM3 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-4Q9EQM3 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Nkx2-4Q9EQM3 Gm12179-201ENSMUST00000118344 1272 ntBASIC12.21□□□□□ -0.45
Nkx2-4Q9EQM3 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-4Q9EQM3 Gm15620-201ENSMUST00000122949 270 ntBASIC12.21□□□□□ -0.45
Nkx2-4Q9EQM3 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-4Q9EQM3 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.21□□□□□ -0.45
Nkx2-4Q9EQM3 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-4Q9EQM3 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.21□□□□□ -0.45
Nkx2-4Q9EQM3 Gm5706-201ENSMUST00000181525 993 ntBASIC12.21□□□□□ -0.45
Nkx2-4Q9EQM3 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.21□□□□□ -0.45
Nkx2-4Q9EQM3 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC12.21□□□□□ -0.45
Nkx2-4Q9EQM3 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-4Q9EQM3 Gm17931-201ENSMUST00000208132 634 ntBASIC12.21□□□□□ -0.45
Nkx2-4Q9EQM3 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.21□□□□□ -0.45
Nkx2-4Q9EQM3 Gm10263-201ENSMUST00000085163 300 ntBASIC12.21□□□□□ -0.45
Nkx2-4Q9EQM3 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.21□□□□□ -0.45
Nkx2-4Q9EQM3 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-4Q9EQM3 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-4Q9EQM3 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-4Q9EQM3 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-4Q9EQM3 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-4Q9EQM3 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-4Q9EQM3 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-4Q9EQM3 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-4Q9EQM3 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-4Q9EQM3 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Nkx2-4Q9EQM3 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Gm9081-201ENSMUST00000182346 991 ntBASIC12.2□□□□□ -0.46
Nkx2-4Q9EQM3 Gm43671-201ENSMUST00000200422 433 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms